Aliases : VAC1, ECB2, ATECB2
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00039p00210570 | EMB2758 | Pentatricopeptide repeat-containing protein At3g12770... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00053p00090700 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At3g13880... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s02193p00008230 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At3g02330,... | 0.02 | OrthoFinder output from all 47 species | |
| AT1G05750 | PDE247, CLB19 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT2G33680 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G08820 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT3G23330 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT4G16835 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT4G32430 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT4G39952 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT5G09950 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g005291 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g015033 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g033700 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g056922 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g069059 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g075693 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g32783 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g06600 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g16997 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g17260 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g35872 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g36010 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g03252 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g03827 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g04930 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g07213 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g07519 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g15903 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g18621 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g19869 | LPA66 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g26262 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g26632 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g26681 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g30855 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g32754 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g33141 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g33170 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g57869 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g61444 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g05266 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g08457 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g22148 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g26992 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g27296 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g27895 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aob_g28228 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g28242 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g28645 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g28679 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g31935 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g36880 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g08782 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g09162 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g17692 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene24209.t1 | VAC1, ECB2,... | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene64477.t1 | OTP82, Aspi01Gene64477 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene66051.t1 | OTP84, Aspi01Gene66051 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0003.g007907 | No alias | not classified & original description: CDS=160-2841 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0215.g058372 | No alias | not classified & original description: CDS=1-2739 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g03404 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g06576 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g16282 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g16998 | REME1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g29385 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g29979 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g31693 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g68945 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g76162 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.14G058600.1 | PTAC9, OSB2,... | ssDNA-binding protein *(OSB) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.16G000100.1 | REME1, Ceric.16G000100 | not classified & original description: pacid=50589905... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.22G034400.1 | Ceric.22G034400 | not classified & original description: pacid=50613809... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.31G002400.1 | Ceric.31G002400 | not classified & original description: pacid=50574432... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g02827 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g12616 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g40815 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g43504 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g08994 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g22734 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g00984 | OSB3 | cofactor of plastid-encoded RNA polymerase *(TAC9) &... | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g06075 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g07052 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g12101 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g12147 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g18910 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g31027 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g72049.1 | PTAC9, OSB2,... | ssDNA-binding protein (OSB). TAC9 cofactor of... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g38580.1 | EMB2261, LOC_Os03g38580 | Pentatricopeptide repeat-containing protein At3g24000,... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g33840.1 | LOC_Os04g33840 | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g38980.1 | LOC_Os04g38980 | Pentatricopeptide repeat-containing protein At4g39952,... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os06g27790.1 | REME1, LOC_Os06g27790 | Pentatricopeptide repeat-containing protein At2g03880,... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g47920.1 | LOC_Os06g47920 | Pentatricopeptide repeat-containing protein At5g44230... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g18984 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g05598 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07406 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g07418 | EMB2758 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g07436 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07847 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g14702 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g18570 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g23152 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g13610 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g05468 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g15842 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g16458 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g20618 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g23751 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g27549 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g40764 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g17858 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g19660 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g21836 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g21989 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g43620 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g03106 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g32595 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g57069 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g06762 | CRR2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g25475 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g30628 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g29710 | EMB2261 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g33539 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0029.g010124 | No alias | ssDNA-binding protein *(OSB) & original description: CDS=208-2547 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0033.g010996 | No alias | not classified & original description: CDS=53-3322 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0043.g012882 | No alias | not classified & original description: CDS=1-2733 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0089.g018665 | No alias | not classified & original description: CDS=8-2563 | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g11848 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g12399 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g13791 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g36635 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo30095 | No alias | Pentatricopeptide repeat-containing protein At3g57430,... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc03g098420.3.1 | Solyc03g098420 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g016540.2.1 | Solyc04g016540 | Pentatricopeptide repeat-containing protein At2g39620... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc07g008890.3.1 | Solyc07g008890 | Pentatricopeptide repeat-containing protein At4g33170... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g00965 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g03178 | REME1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g07522 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g14289 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g14318 | CRR2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g20285 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g25320 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g45261 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g06127 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g10878 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g13752 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g16954 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g23794 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g26548 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g26742 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 523 | 582 |
| IPR002885 | Pentatricopeptide_repeat | 271 | 295 |
| IPR002885 | Pentatricopeptide_repeat | 170 | 192 |
| IPR002885 | Pentatricopeptide_repeat | 198 | 228 |
| IPR002885 | Pentatricopeptide_repeat | 473 | 494 |
| IPR002885 | Pentatricopeptide_repeat | 372 | 398 |
| IPR002885 | Pentatricopeptide_repeat | 297 | 343 |
| IPR002885 | Pentatricopeptide_repeat | 94 | 141 |
| No external refs found! |
