Ppi_g13958 (SBP1)


Aliases : SBP1

Description : not classified & original description: none


Gene families : OG0000315 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000315_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g13958

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000769.9 No alias No description available 0.01 OrthoFinder output from all 47 species
GSVIVT01013266001 No alias No description available 0.02 OrthoFinder output from all 47 species
Lfl_g17171 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g17112 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g09630 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g57078 SBP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e001146_P001 SBP1, Zm00001e001146 Probable BOI-related E3 ubiquitin-protein ligase 3... 0.02 OrthoFinder output from all 47 species
Zm00001e038522_P001 SBP1, Zm00001e038522 Probable BOI-related E3 ubiquitin-protein ligase 3... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA

No InterPro domains available for this sequence

No external refs found!