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  5. Ppi_g13992

Ppi_g13992


Description : not classified & original description: none


Gene families : OG0001497 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001497_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g13992

Target Alias Description ECC score Gene Family Method Actions
AT5G09880 No alias Splicing factor, CC1-like 0.03 OrthoFinder output from all 47 species
Ala_g26371 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21138 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g21139 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g28379 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g32208 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g41657 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g62066 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene58033.t1 Aspi01Gene58033 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g36170 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.27G027600.1 Ceric.27G027600 not classified & original description: pacid=50605291... 0.05 OrthoFinder output from all 47 species
Ceric.33G026000.1 Ceric.33G026000 not classified & original description: pacid=50607594... 0.03 OrthoFinder output from all 47 species
Dac_g08281 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g20118 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g47761 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g09952 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24624 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01023998001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_11513 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_39308 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os03g05830.1 LOC_Os03g05830 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g18833 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g58331 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g34973 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g11719 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g41477 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g25040 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g10142 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g19702 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g29001 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e004710_P005 Zm00001e004710 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e038994_P002 Zm00001e038994 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 163 234
IPR000504 RRM_dom 68 127
IPR000504 RRM_dom 367 419
IPR029123 RBM39_linker 254 361
No external refs found!