Ppi_g14343

Description : component *(eL27) of large ribosomal-subunit (LSU) proteome & original description: none

Gene families : OG0000924 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000924_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ppi_g14343
Cluster	HCCA: Cluster_62

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00032p00176990	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.04	OrthoFinder output from all 47 species
AT2G32220	No alias	Ribosomal L27e protein family	0.04	OrthoFinder output from all 47 species
AT3G22230	No alias	Ribosomal L27e protein family	0.04	OrthoFinder output from all 47 species
AT4G15000	No alias	Ribosomal L27e protein family	0.04	OrthoFinder output from all 47 species
Adi_g042919	No alias	component *(eL27) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Adi_g088547	No alias	component *(eL27) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Ala_g18759	No alias	component *(eL27) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Aob_g21997	No alias	component *(eL27) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Aop_g16882	No alias	component *(eL27) of large ribosomal-subunit (LSU)...	0.1	OrthoFinder output from all 47 species
Aop_g30907	No alias	component *(eL27) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Aop_g33173	No alias	component *(eL27) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Aspi01Gene03460.t1	Aspi01Gene03460	component *(eL27) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Azfi_s0123.g048378	No alias	component *(eL27) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Ceric.11G027700.1	Ceric.11G027700	component *(eL27) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Ceric.22G025300.1	Ceric.22G025300	component *(eL27) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021275.23	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.04	OrthoFinder output from all 47 species
Cre17.g701650	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.04	OrthoFinder output from all 47 species
Dac_g26159	No alias	component *(eL27) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Dcu_g32145	No alias	component *(eL27) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Gb_34700	No alias	component RPL27 of LSU proteome component	0.04	OrthoFinder output from all 47 species
MA_3390g0010	No alias	component RPL27 of LSU proteome component	0.03	OrthoFinder output from all 47 species
Mp4g23910.1	No alias	component RPL27 of LSU proteome component	0.05	OrthoFinder output from all 47 species
Msp_g18021	No alias	component *(eL27) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Sam_g00195	No alias	component *(eL27) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Sam_g30675	No alias	component *(eL27) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Sam_g30677	No alias	component *(eL27) of large ribosomal-subunit (LSU)...	0.07	OrthoFinder output from all 47 species
Smo166700	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.02	OrthoFinder output from all 47 species
Solyc06g073300.1.1	Solyc06g073300	component RPL27 of LSU proteome component	0.07	OrthoFinder output from all 47 species
Spa_g03073	No alias	component *(eL27) of large ribosomal-subunit (LSU)...	0.06	OrthoFinder output from all 47 species
Spa_g24106	No alias	component *(eL27) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Spa_g44975	No alias	component *(eL27) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Tin_g43604	No alias	component *(eL27) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003746	translation elongation factor activity	IEP	HCCA
MF	GO:0004332	fructose-bisphosphate aldolase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
BP	GO:0006090	pyruvate metabolic process	IEP	HCCA
BP	GO:0006091	generation of precursor metabolites and energy	IEP	HCCA
BP	GO:0006096	glycolytic process	IEP	HCCA
BP	GO:0006165	nucleoside diphosphate phosphorylation	IEP	HCCA
BP	GO:0006414	translational elongation	IEP	HCCA
BP	GO:0006757	ATP generation from ADP	IEP	HCCA
BP	GO:0009132	nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009135	purine nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009179	purine ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009185	ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0016052	carbohydrate catabolic process	IEP	HCCA
MF	GO:0016830	carbon-carbon lyase activity	IEP	HCCA
MF	GO:0016832	aldehyde-lyase activity	IEP	HCCA
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	HCCA
CC	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain	IEP	HCCA
BP	GO:0034220	monoatomic ion transmembrane transport	IEP	HCCA
BP	GO:0046031	ADP metabolic process	IEP	HCCA
BP	GO:0046939	nucleotide phosphorylation	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
BP	GO:0098655	monoatomic cation transmembrane transport	IEP	HCCA
BP	GO:0098660	inorganic ion transmembrane transport	IEP	HCCA
BP	GO:0098662	inorganic cation transmembrane transport	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA
BP	GO:1902600	proton transmembrane transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001141	Ribosomal_L27e	52	135
IPR005824	KOW	7	32

External Links

No external refs found!

Ppi_g14343

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation