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  5. Ppi_g15560

Ppi_g15560 (ATABCC5, MRP5, ATMRP5, ABCC5)


Aliases : ATABCC5, MRP5, ATMRP5, ABCC5

Description : subfamily ABCC transporter & original description: none


Gene families : OG0000037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g15560

Target Alias Description ECC score Gene Family Method Actions
Adi_g000264 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g023487 ABCC12, MRP13, ATMRP13 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g33513 MRP10, ATMRP10, ABCC14 subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Als_g14647 ATABCC5, MRP5,... subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g11934 MRP10, ATMRP10, ABCC14 subfamily ABCC transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g07552 MRP11, ABCC13, ATMRP11 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g29615 MRP6, ATMRP6, ABCC8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05224.t1 ATMRP12, MRP12,... subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene05228.t1 AtABCC2, ABCC2,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene09685.t1 ATABCC5, MRP5,... subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene26415.t1 EST3, MRP4,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene29535.t1 MRP10, ATMRP10,... subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene41842.t1 AtABCC2, ABCC2,... glutathione S-conjugate transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene45964.t1 ATABCC5, MRP5,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene64349.t1 AtABCC2, ABCC2,... glutathione S-conjugate transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene64352.t2 AtABCC2, ABCC2,... glutathione S-conjugate transporter & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000718.1 AtABCC2, ABCC2,... ABC transporter C family member 2 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020553.190 ATABCC5, MRP5,... ABC transporter C family member 4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020553.191 ATMRP12, MRP12, ABCC11 ABC transporter C family member 11 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020592.4 ATMRP12, MRP12, ABCC11 ABC transporter C family member 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dcu_g47716 MRP10, ATMRP10, ABCC14 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01021595001 AtABCC2, ABCC2,... Solute transport.primary active transport.ABC... 0.06 OrthoFinder output from all 47 species
Gb_12211 MRP11, ABCC13, ATMRP11 ABC transporter C family member 13 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_12836 ATMRP14, ABCC10, MRP14 ABC transporter C family member 10 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os01g07870.1 ABCC3, ATMRP3,... subfamily ABCC transporter 0.03 OrthoFinder output from all 47 species
Lfl_g07439 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g38983 ATABCC5, MRP5,... subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g19144 MRP6, ATMRP6, ABCC8 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g06645 EST3, MRP4, ATMRP4, ABCC4 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g37519 ABCC3, ATMRP3, MRP3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g55542 EST3, MRP4, ATMRP4, ABCC4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g06901 ATMRP14, ABCC10, MRP14 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g08129 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g07631 MRP10, ATMRP10, ABCC14 subfamily ABCC transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g12667 AtABCC2, ABCC2,... glutathione S-conjugate transporter & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g08960 No alias subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g17500 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc05g014390.4.1 MRP15, ABCC15,... subfamily ABCC transporter 0.03 OrthoFinder output from all 47 species
Spa_g04417 EST3, MRP4, ATMRP4, ABCC4 subfamily ABCC transporter & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g45071 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09916 ATABCC5, MRP5,... subfamily ABCC transporter & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 457 587
IPR011527 ABC1_TM_dom 741 993
IPR011527 ABC1_TM_dom 130 385
IPR003439 ABC_transporter-like_ATP-bd 1075 1222
No external refs found!