Ppi_g15762


Description : component *(APC4) of (APC/C)-dependent ubiquitination platform subcomplex & original description: none


Gene families : OG0006357 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006357_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g15762

Target Alias Description ECC score Gene Family Method Actions
LOC_Os02g54490.1 LOC_Os02g54490 component APC4 of (APC/C)-dependent ubiquitination... 0.04 OrthoFinder output from all 47 species
Len_g24211 No alias component *(APC4) of (APC/C)-dependent ubiquitination... 0.03 OrthoFinder output from all 47 species
MA_10427063g0010 No alias component APC4 of (APC/C)-dependent ubiquitination... 0.03 OrthoFinder output from all 47 species
Sam_g10422 No alias component *(APC4) of (APC/C)-dependent ubiquitination... 0.05 OrthoFinder output from all 47 species
Zm00001e023738_P003 Zm00001e023738 component APC4 of (APC/C)-dependent ubiquitination... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000149 SNARE binding IEP HCCA
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0019905 syntaxin binding IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR024790 APC4_long_dom 277 478
IPR024977 Apc4_WD40_dom 30 115
No external refs found!