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  5. Ppi_g16716

Ppi_g16716 (ALDH2C4, REF1, ALDH1A)


Aliases : ALDH2C4, REF1, ALDH1A

Description : EC_1.2 oxidoreductase acting on aldehyde or oxo group of donor & original description: none


Gene families : OG0000126 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000126_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g16716
Cluster HCCA: Cluster_238

Target Alias Description ECC score Gene Family Method Actions
Ppi_g40748 ALDH5F1, SSADH, SSADH1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g62079 ALDH5F1, SSADH, SSADH1 not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008174 mRNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016556 mRNA modification IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0080009 mRNA methylation IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR015590 Aldehyde_DH_dom 13 476
No external refs found!