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  5. Ppi_g18143

Ppi_g18143 (SPL3)


Aliases : SPL3

Description : SBP-type transcription factor & original description: none


Gene families : OG0000121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g18143
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
AT5G18830 SPL7, ATSPL7 squamosa promoter binding protein-like 7 0.05 OrthoFinder output from all 47 species
Adi_g015319 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g10292 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g25947 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07832 SPL4 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g37607 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene27771.t1 SPL2, Aspi01Gene27771 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene27773.t1 SPL3, Aspi01Gene27773 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene40204.t1 Aspi01Gene40204 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene57316.t1 SPL2, Aspi01Gene57316 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene61092.t1 SPL8, Aspi01Gene61092 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0002.g001662 SPL7, ATSPL7 SBP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Azfi_s0048.g030445 SPL2 SBP-type transcription factor & original description: CDS=29-1837 0.03 OrthoFinder output from all 47 species
Cba_g26158 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g26615 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g32859 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cre02.g085150 SPL4 RNA biosynthesis.transcriptional activation.SBP... 0.01 OrthoFinder output from all 47 species
Dac_g16262 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03904 SPL8 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Len_g40710 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g45815 SPL7, ATSPL7 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g18285 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g32603 No alias SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g23336 SPL3 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g43554 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g49101 SPL7, ATSPL7 regulatory protein *(SPL7) of copper homeostasis &... 0.03 OrthoFinder output from all 47 species
Sam_g24360 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g30123 No alias SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g48834 No alias SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g13303 SPL7, ATSPL7 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14278 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004333 SBP_dom 386 459
No external refs found!