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  5. Ppi_g18684

Ppi_g18684


Description : component *(bL35c) of large plastid ribosomal-subunit proteome & original description: none


Gene families : OG0006536 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006536_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g18684
Cluster HCCA: Cluster_213

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00070230 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
AT2G24090 No alias Ribosomal protein L35 0.08 OrthoFinder output from all 47 species
Adi_g032989 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Aev_g12788 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Ala_g09316 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Als_g18654 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Aob_g08024 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Aop_g18112 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.11 OrthoFinder output from all 47 species
Cba_g00423 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Ceric.15G044500.1 Ceric.15G044500 component *(bL35c) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Cre04.g217932 No alias Protein biosynthesis.organelle translation... 0.06 OrthoFinder output from all 47 species
Dac_g26648 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Dcu_g43056 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Dde_g06179 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Ehy_g03085 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
GSVIVT01012561001 No alias Protein biosynthesis.organelle translation... 0.01 OrthoFinder output from all 47 species
GSVIVT01012574001 No alias Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
Gb_16123 No alias component psRPL35 of large ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species
LOC_Os06g43900.1 LOC_Os06g43900 component psRPL35 of large ribosomal subunit proteome 0.06 OrthoFinder output from all 47 species
Len_g09835 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
MA_181338g0010 No alias component psRPL35 of large ribosomal subunit proteome 0.02 OrthoFinder output from all 47 species
Mp5g05850.1 No alias component psRPL35 of large ribosomal subunit proteome 0.12 OrthoFinder output from all 47 species
Msp_g20481 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Pir_g14080 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Pnu_g04836 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Pp3c22_13420V3.1 Pp3c22_13420 Ribosomal protein L35 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0053.g014110 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.09 OrthoFinder output from all 47 species
Sam_g19900 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Smo444022 No alias Protein biosynthesis.organelle translation... 0.04 OrthoFinder output from all 47 species
Solyc07g006000.3.1 Solyc07g006000 component psRPL35 of large ribosomal subunit proteome 0.1 OrthoFinder output from all 47 species
Spa_g24771 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Zm00001e037448_P001 Zm00001e037448 component psRPL35 of large ribosomal subunit proteome 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004602 glutathione peroxidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR021137 Ribosomal_L35 64 122
No external refs found!