Ppi_g18850 (HIC, KCS13)

Aliases : HIC, KCS13

Description : 3-ketoacyl-CoA synthase *(KCS) & original description: none

Gene families : OG0000066 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ppi_g18850
Cluster	HCCA: Cluster_36

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00025p00218730	KCS10, FDH,...	3-ketoacyl-CoA synthase 10 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
AMTR_s00025p00218830	G2, POP1, KCS6,...	Lipid metabolism.fatty acid synthesis.fatty acid...	0.03	OrthoFinder output from all 47 species
AMTR_s00126p00068780	KCS7,...	Lipid metabolism.fatty acid synthesis.fatty acid...	0.03	OrthoFinder output from all 47 species
AT1G71160	KCS7	3-ketoacyl-CoA synthase 7	0.04	OrthoFinder output from all 47 species
AT3G52160	KCS15	3-ketoacyl-CoA synthase 15	0.04	OrthoFinder output from all 47 species
AT4G34510	KCS17	3-ketoacyl-CoA synthase 17	0.04	OrthoFinder output from all 47 species
AT5G43760	KCS20	3-ketoacyl-CoA synthase 20	0.03	OrthoFinder output from all 47 species
AT5G49070	KCS21	3-ketoacyl-CoA synthase 21	0.05	OrthoFinder output from all 47 species
Aop_g69414	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.07	OrthoFinder output from all 47 species
Azfi_s0082.g038722	KCS1	3-ketoacyl-CoA synthase *(KCS) & original description: CDS=1-1428	0.03	OrthoFinder output from all 47 species
Azfi_s0104.g044813	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: CDS=1-1584	0.04	OrthoFinder output from all 47 species
Dde_g47176	KCS1	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g15995	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01000710001	KCS20	Lipid metabolism.fatty acid synthesis.fatty acid...	0.05	OrthoFinder output from all 47 species
Gb_06885	KCS4	3-ketoacyl-CoA synthase (KCS)	0.03	OrthoFinder output from all 47 species
Gb_08308	KCS1	3-ketoacyl-CoA synthase (KCS)	0.03	OrthoFinder output from all 47 species
LOC_Os04g02640.1	G2, POP1, KCS6,...	3-ketoacyl-CoA synthase (KCS)	0.03	OrthoFinder output from all 47 species
Lfl_g05573	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
MA_10433600g0010	KCS20	3-ketoacyl-CoA synthase (KCS)	0.03	OrthoFinder output from all 47 species
MA_183114g0010	G2, POP1, KCS6,...	3-ketoacyl-CoA synthase 6 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
MA_35727g0020	G2, POP1, KCS6,...	3-ketoacyl-CoA synthase 6 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
MA_415118g0020	KCS11	3-ketoacyl-CoA synthase 11 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
MA_5988g0010	KCS4	3-ketoacyl-CoA synthase (KCS)	0.02	OrthoFinder output from all 47 species
MA_759169g0010	KCS10, FDH	3-ketoacyl-CoA synthase (KCS)	0.04	OrthoFinder output from all 47 species
MA_880820g0010	KCS20	3-ketoacyl-CoA synthase 20 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Pir_g04386	KCS10, FDH	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g21412	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Solyc08g067410.2.1	KCS11, Solyc08g067410	3-ketoacyl-CoA synthase (KCS)	0.03	OrthoFinder output from all 47 species
Tin_g07216	KCS4	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g08170	KCS1	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g10768	KCS10, FDH	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g12411	KCS11	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e030953_P001	G2, POP1, KCS6,...	3-ketoacyl-CoA synthase (KCS)	0.05	OrthoFinder output from all 47 species
Zm00001e038699_P001	G2, POP1, KCS6,...	3-ketoacyl-CoA synthase (KCS)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006631	fatty acid metabolic process	None	Extended
BP	GO:0006633	fatty acid biosynthetic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	acyltransferase activity	None	Extended
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEA	Interproscan
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0005634	nucleus	IEP	HCCA
BP	GO:0006479	protein methylation	IEP	HCCA
MF	GO:0008168	methyltransferase activity	IEP	HCCA
MF	GO:0008170	N-methyltransferase activity	IEP	HCCA
BP	GO:0008213	protein alkylation	IEP	HCCA
MF	GO:0008270	zinc ion binding	IEP	HCCA
MF	GO:0008276	protein methyltransferase activity	IEP	HCCA
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IEP	HCCA
MF	GO:0016278	lysine N-methyltransferase activity	IEP	HCCA
MF	GO:0016279	protein-lysine N-methyltransferase activity	IEP	HCCA
BP	GO:0016570	histone modification	IEP	HCCA
BP	GO:0016571	histone methylation	IEP	HCCA
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	HCCA
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	HCCA
BP	GO:0018022	peptidyl-lysine methylation	IEP	HCCA
MF	GO:0018024	histone lysine N-methyltransferase activity	IEP	HCCA
BP	GO:0018193	peptidyl-amino acid modification	IEP	HCCA
BP	GO:0018205	peptidyl-lysine modification	IEP	HCCA
BP	GO:0032259	methylation	IEP	HCCA
BP	GO:0034968	histone lysine methylation	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
MF	GO:0042054	histone methyltransferase activity	IEP	HCCA
CC	GO:0043227	membrane-bounded organelle	IEP	HCCA
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0043414	macromolecule methylation	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013601	FAE1_typ3_polyketide_synth	114	397
IPR013747	ACP_syn_III_C	422	503

External Links

No external refs found!

Ppi_g18850 (HIC, KCS13)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation