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  5. Ppi_g20543

Ppi_g20543


Description : component *(eL27) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0000924 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000924_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g20543
Cluster HCCA: Cluster_218

Target Alias Description ECC score Gene Family Method Actions
AT3G22230 No alias Ribosomal L27e protein family 0.04 OrthoFinder output from all 47 species
AT4G15000 No alias Ribosomal L27e protein family 0.04 OrthoFinder output from all 47 species
Adi_g088547 No alias component *(eL27) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ala_g18759 No alias component *(eL27) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ala_g39103 No alias component *(eL27) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Als_g54848 No alias component *(eL27) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Aob_g21997 No alias component *(eL27) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aop_g30907 No alias component *(eL27) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Ceric.22G025300.1 Ceric.22G025300 component *(eL27) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021275.23 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Cre17.g701650 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
Dac_g26159 No alias component *(eL27) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Len_g27313 No alias component *(eL27) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
MA_3390g0010 No alias component RPL27 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Mp4g23910.1 No alias component RPL27 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Ppi_g22762 No alias component *(eL27) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ppi_g22766 No alias component *(eL27) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ppi_g33968 No alias component *(eL27) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g13937 No alias component *(eL27) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Sam_g20317 No alias component *(eL27) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Sam_g30677 No alias component *(eL27) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Solyc06g073300.1.1 Solyc06g073300 component RPL27 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Solyc07g043360.1.1 Solyc07g043360 component RPL27 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Spa_g03073 No alias component *(eL27) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Spa_g44975 No alias component *(eL27) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP HCCA
CC GO:0005740 mitochondrial envelope IEP HCCA
CC GO:0005751 mitochondrial respiratory chain complex IV IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006123 mitochondrial electron transport, cytochrome c to oxygen IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009060 aerobic respiration IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
BP GO:0019646 aerobic electron transport chain IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
CC GO:0031967 organelle envelope IEP HCCA
CC GO:0031975 envelope IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
CC GO:0045277 respiratory chain complex IV IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
InterPro domains Description Start Stop
IPR001141 Ribosomal_L27e 52 134
No external refs found!