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  5. Ppi_g22255

Ppi_g22255


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g22255

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272900 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
AMTR_s00003p00263110 No alias Pentatricopeptide repeat-containing protein At1g03540... 0.02 OrthoFinder output from all 47 species
AMTR_s00078p00067180 EMB2261,... Pentatricopeptide repeat-containing protein At2g46050,... 0.02 OrthoFinder output from all 47 species
Aev_g09730 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g28165 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g38174 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05917 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18887 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g07964 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27830 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27846 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28209 DOT4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g33010 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g35556 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g43404 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene09926.t1 CRR22, Aspi01Gene09926 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0028.g023921 No alias not classified & original description: CDS=1-2157 0.02 OrthoFinder output from all 47 species
Azfi_s0544.g076391 No alias not classified & original description: CDS=1-906 0.02 OrthoFinder output from all 47 species
Azfi_s1396.g102567 No alias not classified & original description: CDS=1-1371 0.02 OrthoFinder output from all 47 species
Cba_g02715 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07747 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g29658 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34697 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.32G014100.1 Ceric.32G014100 not classified & original description: pacid=50597391... 0.03 OrthoFinder output from all 47 species
Dac_g18536 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g18772 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g19062 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g24604 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g32204 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g44564 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g14626 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g36025 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g45110 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g25446 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28511 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07891 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12413 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19239 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g44856 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05649 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07756 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g22363 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g18146 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25096 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25697 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30030 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g34877 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g03106 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03420 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g08638 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11784 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12577 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13595 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14849 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g35144 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63511 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53684 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0101.g019756 No alias not classified & original description: CDS=1-2544 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0111.g020713 No alias not classified & original description: CDS=1-3843 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0186.g025088 No alias not classified & original description: CDS=1-2760 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0245.g026691 No alias not classified & original description: CDS=1-2898 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0345.g027287 No alias not classified & original description: CDS=1-2001 0.02 OrthoFinder output from all 47 species
Sam_g05036 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24540 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g24878 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g26571 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g45851 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g115800.1.1 Solyc03g115800 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Spa_g56476 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06522 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g26895 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g31914 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006432 phenylalanyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 588 635
IPR002885 Pentatricopeptide_repeat 282 328
IPR002885 Pentatricopeptide_repeat 485 533
IPR002885 Pentatricopeptide_repeat 892 940
IPR002885 Pentatricopeptide_repeat 688 735
IPR002885 Pentatricopeptide_repeat 384 431
IPR002885 Pentatricopeptide_repeat 180 226
IPR002885 Pentatricopeptide_repeat 789 836
IPR002885 Pentatricopeptide_repeat 562 585
IPR002885 Pentatricopeptide_repeat 663 683
IPR002885 Pentatricopeptide_repeat 764 788
IPR002885 Pentatricopeptide_repeat 79 108
IPR002885 Pentatricopeptide_repeat 358 378
No external refs found!