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  5. Ppi_g23162

Ppi_g23162


Description : component *(eS25) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0000493 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000493_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g23162
Cluster HCCA: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
AT4G39200 No alias Ribosomal protein S25 family protein 0.02 OrthoFinder output from all 47 species
Aob_g09889 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Aob_g38505 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000037.5 No alias 40S ribosomal protein S25-4 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cre08.g382500 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
Dac_g25480 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Dcu_g23757 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Dcu_g29355 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Dcu_g35742 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Gb_01693 No alias component RPS25 of SSU proteome 0.02 OrthoFinder output from all 47 species
LOC_Os08g44480.1 LOC_Os08g44480 component RPS25 of SSU proteome 0.03 OrthoFinder output from all 47 species
LOC_Os09g39540.1 LOC_Os09g39540 component RPS25 of SSU proteome 0.03 OrthoFinder output from all 47 species
MA_104137g0010 No alias component RPS25 of SSU proteome 0.03 OrthoFinder output from all 47 species
MA_10430279g0010 No alias component RPS25 of SSU proteome 0.02 OrthoFinder output from all 47 species
Mp4g06120.1 No alias component RPS25 of SSU proteome 0.03 OrthoFinder output from all 47 species
Nbi_g34943 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Pir_g08680 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Pir_g34886 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Pp3c14_13580V3.1 Pp3c14_13580 Ribosomal protein S25 family protein 0.02 OrthoFinder output from all 47 species
Pp3c17_4670V3.1 Pp3c17_4670 Ribosomal protein S25 family protein 0.02 OrthoFinder output from all 47 species
Pp3c2_14800V3.1 Pp3c2_14800 Ribosomal protein S25 family protein 0.02 OrthoFinder output from all 47 species
Ppi_g22394 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Ppi_g26828 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Ppi_g51150 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 47 species
Sam_g20177 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Sam_g30236 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Sam_g31087 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Sam_g31249 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Sam_g40302 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Smo172404 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
Spa_g42651 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Spa_g56646 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Tin_g43109 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Zm00001e028930_P001 Zm00001e028930 component RPS25 of SSU proteome 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
BP GO:0007155 cell adhesion IEP HCCA
BP GO:0007160 cell-matrix adhesion IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0031589 cell-substrate adhesion IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR004977 Ribosomal_S25 3 88
No external refs found!