1. Home
  2. Species
  3. Pyrrosia piloselloides
  4. Sequence
  5. Ppi_g23613

Ppi_g23613


Description : not classified & original description: none


Gene families : OG0004676 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004676_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g23613
Cluster HCCA: Cluster_213

Target Alias Description ECC score Gene Family Method Actions
AT4G26860 No alias Predicted pyridoxal phosphate-dependent enzyme, YBL036C type 0.03 OrthoFinder output from all 47 species
Adi_g079258 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cre01.g010848 No alias No description available 0.04 OrthoFinder output from all 47 species
Dcu_g39831 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g12636 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g03148 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Gb_20010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_20012 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g72205.1 LOC_Os01g72205 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os05g05740.1 LOC_Os05g05740 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g07283 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g36441 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Smo83798 No alias No description available 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008235 metalloexopeptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
MF GO:0070006 metalloaminopeptidase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001608 Ala_racemase_N 42 259
No external refs found!