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  5. Ppi_g24199

Ppi_g24199


Description : component *(eL31) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0000630 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000630_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g24199
Cluster HCCA: Cluster_275

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00233860 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Adi_g045139 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Als_g57620 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Als_g58224 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g77224 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Cre12.g489153 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Dac_g26744 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Dcu_g45156 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Ehy_g13901 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
GSVIVT01032061001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
LOC_Os06g21480.1 LOC_Os06g21480 component RPL31 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Lfl_g18251 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Pir_g49678 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Pp3c10_8090V3.1 Pp3c10_8090 Ribosomal protein L31e family protein 0.01 OrthoFinder output from all 47 species
Pp3c14_7550V3.1 Pp3c14_7550 Ribosomal protein L31e family protein 0.01 OrthoFinder output from all 47 species
Pp3c25_8980V3.1 Pp3c25_8980 Ribosomal protein L31e family protein 0.02 OrthoFinder output from all 47 species
Pp3c2_16490V3.1 Pp3c2_16490 Ribosomal protein L31e family protein 0.01 OrthoFinder output from all 47 species
Ppi_g34427 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Sam_g05538 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Tin_g42230 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Zm00001e036927_P001 Zm00001e036927 component RPL31 of LSU proteome component 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
BP GO:0007218 neuropeptide signaling pathway IEP HCCA
MF GO:0008199 ferric iron binding IEP HCCA
CC GO:0030141 secretory granule IEP HCCA
CC GO:0031410 cytoplasmic vesicle IEP HCCA
CC GO:0031982 vesicle IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
CC GO:0097708 intracellular vesicle IEP HCCA
CC GO:0099503 secretory vesicle IEP HCCA
InterPro domains Description Start Stop
IPR000054 Ribosomal_L31e 17 97
No external refs found!