Aliases : ATRZ-1A
Description : not classified & original description: none
Gene families : OG0000073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000073_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ppi_g25732 | |
| Cluster | HCCA: Cluster_232 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g050015 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g078308 | GR-RBP5 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g06710 | No alias | RNA chaperone *(RZ1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g12373 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Als_g24232 | GR-RBP4, GRP4 | RNA editing factor *(ORRM3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g44798 | GR-RBP3 | RNA editing factor *(ORRM3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g06469 | GRP2, ATGRP2, GR-RBP2 | RNA editing factor *(ORRM3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0468.g072856 | GR-RBP4, GRP4 | not classified & original description: CDS=1-582 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g06390 | CCR2, ATGRP7,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.1Z053200.1 | ATRZ-1A, Ceric.1Z053200 | RNA chaperone *(RZ1) & original description:... | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g02153 | No alias | RNA chaperone *(RZ1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g03970 | GR-RBP5 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g06280 | GR-RBP4, GRP4 | RNA editing factor *(ORRM3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g21349 | CCR2, ATGRP7,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g11354 | GR-RBP4, GRP4 | RNA editing factor *(ORRM3) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Lfl_g24303 | CCR2, ATGRP7,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g25551 | GRP2, ATGRP2, GR-RBP2 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| MA_9594430g0010 | No alias | RNA chaperone (RZ1|GR-RBP) | 0.01 | OrthoFinder output from all 47 species | |
| Nbi_g23738 | No alias | RNA chaperone *(RZ1) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ore_g18711 | ATRZ-1A | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g17831 | ATRZ-1A | RNA chaperone *(RZ1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g26805 | No alias | RNA chaperone *(RZ1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c4_6610V3.1 | GRP2, ATGRP2,... | glycine-rich RNA-binding protein 3 | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g05591 | GRP2, ATGRP2, GR-RBP2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g17921 | GR-RBP4, GRP4 | RNA editing factor *(ORRM3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g09617 | No alias | RNA editing factor *(ORRM3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g09618 | No alias | RNA editing factor *(ORRM3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g14736 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g38660 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc11g073238.1.1 | Solyc11g073238 | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| Tin_g07967 | CCR2, ATGRP7,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g10113 | ATRZ-1A | RNA chaperone *(RZ1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g30660 | GR-RBP3 | RNA ediTing factor *(ORRM3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e028502_P003 | Zm00001e028502 | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003697 | single-stranded DNA binding | IEP | HCCA |
| MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
| MF | GO:0004066 | asparagine synthase (glutamine-hydrolyzing) activity | IEP | HCCA |
| BP | GO:0006413 | translational initiation | IEP | HCCA |
| BP | GO:0006528 | asparagine metabolic process | IEP | HCCA |
| BP | GO:0006529 | asparagine biosynthetic process | IEP | HCCA |
| BP | GO:0006952 | defense response | IEP | HCCA |
| BP | GO:0008652 | amino acid biosynthetic process | IEP | HCCA |
| BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | HCCA |
| BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | HCCA |
| BP | GO:0016053 | organic acid biosynthetic process | IEP | HCCA |
| MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | HCCA |
| MF | GO:0016884 | carbon-nitrogen ligase activity, with glutamine as amido-N-donor | IEP | HCCA |
| MF | GO:0043531 | ADP binding | IEP | HCCA |
| BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | HCCA |
| BP | GO:1901605 | alpha-amino acid metabolic process | IEP | HCCA |
| BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
