Description : component *(eL38) of large ribosomal-subunit (LSU) proteome & original description: none
Gene families : OG0004541 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004541_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ppi_g26712 | |
| Cluster | HCCA: Cluster_109 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre07.g325746 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_16529 | No alias | component RPL38 of LSU proteome component | 0.04 | OrthoFinder output from all 47 species | |
| MA_20588g0010 | No alias | component RPL38 of LSU proteome component | 0.04 | OrthoFinder output from all 47 species | |
| Pp3c10_20240V3.1 | Pp3c10_20240 | Ribosomal L38e protein family | 0.01 | OrthoFinder output from all 47 species | |
| Pp3c12_17990V3.1 | Pp3c12_17990 | Ribosomal L38e protein family | 0.01 | OrthoFinder output from all 47 species | |
| Pp3c4_11700V3.1 | Pp3c4_11700 | Ribosomal L38e protein family | 0.01 | OrthoFinder output from all 47 species | |
| Smo270247 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
| CC | GO:0005840 | ribosome | IEA | Interproscan |
| BP | GO:0006412 | translation | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004497 | monooxygenase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005507 | copper ion binding | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | HCCA |
| MF | GO:0016715 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| MF | GO:0044183 | protein folding chaperone | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| MF | GO:0140662 | ATP-dependent protein folding chaperone | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002675 | Ribosomal_L38e | 2 | 91 |
| No external refs found! |
