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  5. Ppi_g26716

Ppi_g26716


Description : component *(eL8) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0001502 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001502_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g26716
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
AT2G47610 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.06 OrthoFinder output from all 47 species
AT3G62870 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.05 OrthoFinder output from all 47 species
Adi_g007366 No alias component *(eL8) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Adi_g117976 No alias component *(eL8) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ala_g00994 No alias component *(eL8) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Ala_g38500 No alias component *(eL8) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aop_g02035 No alias component *(eL8) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Aop_g10465 No alias component *(eL8) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Ceric.08G064100.1 Ceric.08G064100 component *(eL8) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Ceric.28G063900.1 Ceric.28G063900 component *(eL8) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000128.22 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 OrthoFinder output from all 47 species
Cre12.g529651 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 OrthoFinder output from all 47 species
Dac_g12130 No alias component *(eL8) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Dcu_g30506 No alias component *(eL8) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
GSVIVT01008585001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 OrthoFinder output from all 47 species
GSVIVT01033050001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
GSVIVT01036540001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
LOC_Os08g23710.1 LOC_Os08g23710 component RPL7a of LSU proteome component 0.02 OrthoFinder output from all 47 species
LOC_Os09g32976.1 LOC_Os09g32976 component RPL7a of LSU proteome component 0.06 OrthoFinder output from all 47 species
Len_g06165 No alias component *(eL8) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Len_g31217 No alias component *(eL8) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
MA_109678g0010 No alias component RPL7a of LSU proteome component 0.04 OrthoFinder output from all 47 species
Mp2g23250.1 No alias component RPL7a of LSU proteome component 0.05 OrthoFinder output from all 47 species
Mp8g17650.1 No alias component RPL7a of LSU proteome component 0.03 OrthoFinder output from all 47 species
Msp_g01446 No alias component *(eL8) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ppi_g16513 No alias component *(eL8) of large ribosomal-subunit (LSU)... 0.08 OrthoFinder output from all 47 species
Sam_g06600 No alias component *(eL8) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Spa_g10426 No alias component *(eL8) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Spa_g48863 No alias component *(eL8) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Tin_g40004 No alias component *(eL8) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Zm00001e010129_P001 Zm00001e010129 component RPL7a of LSU proteome component 0.07 OrthoFinder output from all 47 species
Zm00001e034633_P002 Zm00001e034633 component RPL7a of LSU proteome component 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
BP GO:0006810 transport IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
InterPro domains Description Start Stop
IPR004038 Ribosomal_L7Ae/L30e/S12e/Gad45 176 257
No external refs found!