1. Home
  2. Species
  3. Pyrrosia piloselloides
  4. Sequence
  5. Ppi_g28715

Ppi_g28715 (AGL13)


Aliases : AGL13

Description : MADS/AGL-type transcription factor & original description: none


Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g28715

Target Alias Description ECC score Gene Family Method Actions
Ala_g28162 AGL2, SEP1 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g28471 SHP2, AGL5 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g17970 AGL16 MADS/AGL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene49755.t1 Aspi01Gene49755 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene72145.t1 AGL30, Aspi01Gene72145 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0073.g037211 AGL104 MADS/AGL-type transcription factor & original... 0.05 OrthoFinder output from all 47 species
Ceric.12G051800.1 GL19, AGL19,... MADS/AGL-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dde_g50123 AGL3, SEP4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g32401 AGL10, CAL1, CAL not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os06g22540.1 LOC_Os06g22540 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os12g21850.1 AGL61, DIA,... transcription factor (MADS/AGL) 0.02 OrthoFinder output from all 47 species
Pir_g19814 AGL10, CAL1, CAL MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g29613 STK, AGL11 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Smo437868 AGL29 RNA biosynthesis.transcriptional activation.MADS box... 0.03 OrthoFinder output from all 47 species
Spa_g04680 AGL16 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20318 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002487 TF_Kbox 112 163
IPR002100 TF_MADSbox 16 63
No external refs found!