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  5. Ppi_g29010

Ppi_g29010


Description : subfamily ABCG transporter & original description: none


Gene families : OG0000438 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000438_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g29010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00153830 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
AMTR_s00011p00258490 ABCG14,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
AMTR_s01016p00008750 evm_27.TU.AmTr_v1... ABC transporter G family member 22 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Ala_g18590 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32768 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Als_g50767 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g03570 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g63592 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene00019.t1 Aspi01Gene00019 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene09991.t1 Aspi01Gene09991 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36520.t1 Aspi01Gene36520 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene71266.t1 Aspi01Gene71266 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g22394 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g08201 ABCG26, WBC27 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g06815 No alias subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g22600 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01001660001 No alias Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
GSVIVT01014733001 ABCG26, WBC27 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Len_g37001 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g30819 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g01338 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13835 ABCG26, WBC27 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0048.g013631 No alias subfamily ABCG transporter & original description: CDS=1-2199 0.03 OrthoFinder output from all 47 species
Sam_g30197 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g30198 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g063400.3.1 Solyc07g063400 subfamily ABCG transporter 0.01 OrthoFinder output from all 47 species
Tin_g09850 No alias subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g28068 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 220 377
IPR013525 ABC_2_trans 558 766
No external refs found!