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  5. Ppi_g29452

Ppi_g29452 (GLUR3, GLR3.4, ATGLR3.4)


Aliases : GLUR3, GLR3.4, ATGLR3.4

Description : ligand-gated cation channel *(GLR) & original description: none


Gene families : OG0000075 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g29452

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00179820 GLR2.2,... Solute transport.channels.GLR ligand-gated cation channel 0.02 OrthoFinder output from all 47 species
AMTR_s00019p00180640 GLR2.8,... Solute transport.channels.GLR ligand-gated cation channel 0.03 OrthoFinder output from all 47 species
AMTR_s00019p00180760 GLR2.3,... Solute transport.channels.GLR ligand-gated cation channel 0.03 OrthoFinder output from all 47 species
AMTR_s00019p00184790 GLR2.7,... Solute transport.channels.GLR ligand-gated cation channel 0.03 OrthoFinder output from all 47 species
AMTR_s00062p00055860 GLR3.3,... Solute transport.channels.GLR ligand-gated cation channel 0.02 OrthoFinder output from all 47 species
AT3G04110 ATGLR1.1, GLR1.1, GLR1 glutamate receptor 1.1 0.02 OrthoFinder output from all 47 species
AT3G51480 GLR3.6, ATGLR3.6 glutamate receptor 3.6 0.03 OrthoFinder output from all 47 species
AT4G31710 GLR2.4, ATGLR2.4 glutamate receptor 2.4 0.04 OrthoFinder output from all 47 species
AT5G11210 GLR2.5, ATGLR2.5 glutamate receptor 2.5 0.02 OrthoFinder output from all 47 species
AT5G48410 ATGLR1.3, GLR1.3 glutamate receptor 1.3 0.02 OrthoFinder output from all 47 species
Adi_g002041 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g059369 GLUR3, GLR3.4, ATGLR3.4 ligand-gated cation channel *(GLR) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g13740 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g43014 GLR3.6, ATGLR3.6 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g06023 ATGLR3.5, GLR6, GLR3.5 ligand-gated cation channel *(GLR) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01804 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene41861.t1 GLR3.3,... ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene49377.t1 ATGLR3.5, GLR6,... ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene63338.t1 GLR2.8,... ligand-gated cation channel *(GLR) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene64327.t1 ATGLR3.5, GLR6,... ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.35G032300.1 GLR3.3,... ligand-gated cation channel *(GLR) & original... 0.04 OrthoFinder output from all 47 species
Dac_g46260 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g51771 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23137 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14399 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g20777 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26350 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01022297001 GLR3.6, ATGLR3.6 Solute transport.channels.GLR ligand-gated cation channel 0.03 OrthoFinder output from all 47 species
GSVIVT01030602001 GLUR3, GLR3.4, ATGLR3.4 Solute transport.channels.GLR ligand-gated cation channel 0.04 OrthoFinder output from all 47 species
GSVIVT01033132001 GLR2.8, ATGLR2.8 Solute transport.channels.GLR ligand-gated cation channel 0.03 OrthoFinder output from all 47 species
GSVIVT01033150001 GLR2.7, ATGLR2.7 Solute transport.channels.GLR ligand-gated cation channel 0.03 OrthoFinder output from all 47 species
GSVIVT01033160001 GLR2.8, ATGLR2.8 Solute transport.channels.GLR ligand-gated cation channel 0.03 OrthoFinder output from all 47 species
LOC_Os04g49570.2 GLR3.3,... ligand-gated cation channel (GLR) 0.02 OrthoFinder output from all 47 species
LOC_Os06g09050.1 GLR2.8,... ligand-gated cation channel (GLR) 0.02 OrthoFinder output from all 47 species
LOC_Os07g01310.1 GLUR3, GLR3.4,... ligand-gated cation channel (GLR) 0.04 OrthoFinder output from all 47 species
Len_g24226 GLR3.6, ATGLR3.6 ligand-gated cation channel *(GLR) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g28228 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g29844 ATGLR3.5, GLR6, GLR3.5 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10428521g0010 GLR3.3, ATGLR3.3 ligand-gated cation channel (GLR) 0.02 OrthoFinder output from all 47 species
MA_10430921g0010 ATGLR3.1, GLR2,... ligand-gated cation channel (GLR) 0.02 OrthoFinder output from all 47 species
MA_212254g0010 GLR3.3, ATGLR3.3 ligand-gated cation channel (GLR) 0.04 OrthoFinder output from all 47 species
MA_23282g0010 GLUR3, GLR3.4, ATGLR3.4 ligand-gated cation channel (GLR) 0.02 OrthoFinder output from all 47 species
MA_354015g0010 GLUR3, GLR3.4, ATGLR3.4 ligand-gated cation channel (GLR) 0.02 OrthoFinder output from all 47 species
MA_391859g0010 ATGLR3.2,... ligand-gated cation channel (GLR) 0.03 OrthoFinder output from all 47 species
MA_43501g0010 GLR3.3, ATGLR3.3 ligand-gated cation channel (GLR) 0.03 OrthoFinder output from all 47 species
MA_958834g0010 ATGLR3.2,... ligand-gated cation channel (GLR) 0.03 OrthoFinder output from all 47 species
Nbi_g22106 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g26398 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0033.g011008 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original... 0.03 OrthoFinder output from all 47 species
Solyc02g077290.2.1 ATGLR2.9,... ligand-gated cation channel (GLR) 0.02 OrthoFinder output from all 47 species
Solyc02g082480.3.1 GLR3.6,... ligand-gated cation channel (GLR) 0.03 OrthoFinder output from all 47 species
Spa_g54501 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e009847_P001 GLR2.8,... ligand-gated cation channel (GLR) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0015276 ligand-gated monoatomic ion channel activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR001320 Iontro_rcpt_C 899 931
IPR001638 Solute-binding_3/MltF_N 578 898
IPR001828 ANF_lig-bd_rcpt 118 476
No external refs found!