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  5. Ppi_g29940

Ppi_g29940


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g29940

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00259620 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g35030,... 0.03 OrthoFinder output from all 47 species
AMTR_s00103p00113040 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g65570... 0.02 OrthoFinder output from all 47 species
AT3G20730 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G47840 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g32888 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12986 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g13276 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g16619 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g19798 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g06520 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g08423 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g18696 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27291 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27561 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27902 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37589 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02544 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g15999 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16217 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g16738 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g25532 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g26804 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g27468 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g61512 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g69046 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s1395.g102559 No alias not classified & original description: CDS=1-912 0.08 OrthoFinder output from all 47 species
Azfi_s1756.g106494 No alias not classified & original description: CDS=1-1938 0.05 OrthoFinder output from all 47 species
Ceric.28G057800.1 REME1, Ceric.28G057800 not classified & original description: pacid=50570331... 0.07 OrthoFinder output from all 47 species
Dac_g43238 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g47718 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g18082 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24902 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26321 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g30475 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g30664 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46556 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03091 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g07460 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g09249 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g21750 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g55689 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g56988 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g57437 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07103 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33314 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g17283 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g17747 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g41402 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g45693 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g45780 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04467 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g06293 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g07006 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g07805 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09669 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10323 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g10358 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g11479 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g15250 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15564 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g16605 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g20615 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27539 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27836 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g28118 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g28128 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g41042 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g41060 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g10883 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12907 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g15141 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g29809 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05733 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06848 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g12231 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13748 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g15402 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26323 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g30171 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g35674 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g36708 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g46568 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo99677 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
Solyc12g096680.1.1 REME1, Solyc12g096680 Pentatricopeptide repeat-containing protein At2g03880,... 0.02 OrthoFinder output from all 47 species
Tin_g04725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07560 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g12955 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g16803 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20839 LOI1, MEF11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26447 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g39356 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e040855_P003 Zm00001e040855 Pentatricopeptide repeat-containing protein At2g37320... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004057 arginyltransferase activity IEP HCCA
BP GO:0016598 protein arginylation IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016755 aminoacyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 692 717
IPR002885 Pentatricopeptide_repeat 87 108
IPR002885 Pentatricopeptide_repeat 592 612
IPR002885 Pentatricopeptide_repeat 289 309
IPR002885 Pentatricopeptide_repeat 188 210
IPR002885 Pentatricopeptide_repeat 418 448
IPR002885 Pentatricopeptide_repeat 319 343
IPR002885 Pentatricopeptide_repeat 19 41
IPR002885 Pentatricopeptide_repeat 517 564
IPR002885 Pentatricopeptide_repeat 618 665
IPR002885 Pentatricopeptide_repeat 113 159
IPR002885 Pentatricopeptide_repeat 214 261
No external refs found!