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  5. Ppi_g30116

Ppi_g30116


Description : subgroup ERF-III transcription factor & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g30116

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00148470 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
AMTR_s00016p00092590 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
AMTR_s00023p00044590 DREB2A, DREB2,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AT2G22200 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT2G44940 No alias Integrase-type DNA-binding superfamily protein 0.05 OrthoFinder output from all 47 species
AT4G27950 CRF4 cytokinin response factor 4 0.04 OrthoFinder output from all 47 species
AT5G25810 tny Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g031493 tny subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aev_g07817 No alias subgroup ERF-VI transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g08193 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.04 OrthoFinder output from all 47 species
Aev_g17007 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g11527 TINY2 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aob_g33961 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g40604 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.05 OrthoFinder output from all 47 species
Aop_g10291 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.01G088400.1 Ceric.01G088400 subgroup ERF-V transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ceric.08G029900.1 Ceric.08G029900 not classified & original description: pacid=50638924... 0.05 OrthoFinder output from all 47 species
Ceric.19G006100.1 HRE2, Ceric.19G006100 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Ceric.33G045200.1 ATERF12, ERF12,... subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g06247 ERF72, EBP, ATEBP, RAP2.3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g11691 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ehy_g01884 DEAR2 subgroup ERF-II transcription factor *(ERF19/20) &... 0.02 OrthoFinder output from all 47 species
Ehy_g20228 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g25048 tny subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g28886 DEAR3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01035098001 ERF72, EBP, ATEBP, RAP2.3 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 OrthoFinder output from all 47 species
Gb_02790 No alias transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Gb_35015 RAP2.12 transcription factor (ERF) 0.05 OrthoFinder output from all 47 species
LOC_Os01g12440.1 TMO3, CRF2,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os01g58420.1 ATERF4, RAP2.5,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os01g64790.1 ERF110, LOC_Os01g64790 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os02g10760.1 WIN1, SHN1,... transcription factor (ERF). SHN-type cutin and suberin... 0.01 OrthoFinder output from all 47 species
LOC_Os02g32040.1 LOC_Os02g32040 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os02g32140.1 Rap2.6L, LOC_Os02g32140 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os02g45420.1 LOC_Os02g45420 transcription factor (DREB) 0.01 OrthoFinder output from all 47 species
LOC_Os02g52670.1 ERF110, LOC_Os02g52670 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os05g36100.1 ERF110, LOC_Os05g36100 transcription factor (ERF) 0.01 OrthoFinder output from all 47 species
LOC_Os06g08340.1 LOC_Os06g08340 transcription factor (ERF) 0.01 OrthoFinder output from all 47 species
LOC_Os06g10780.1 LOC_Os06g10780 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
LOC_Os07g12510.1 ERF110, LOC_Os07g12510 transcription factor (ERF) 0.01 OrthoFinder output from all 47 species
LOC_Os07g47330.1 PUCHI, LOC_Os07g47330 transcription factor (ERF) 0.01 OrthoFinder output from all 47 species
LOC_Os08g07700.1 LOC_Os08g07700 Ethylene-responsive transcription factor ERF087... 0.02 OrthoFinder output from all 47 species
LOC_Os12g40960.1 LOC_Os12g40960 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10274g0010 Rap2.6L transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
MA_137148g0010 ATERF4, RAP2.5,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
MA_225124g0010 ERF-1, ATERF-1 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Msp_g06492 DREB26 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09626 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ore_g30524 TMO3, CRF2 subgroup ERF-VI transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g05239 ERF72, EBP, ATEBP, RAP2.3 transcription factor component *(HRE/RAP2.12) of... 0.04 OrthoFinder output from all 47 species
Pir_g42405 No alias subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.03 OrthoFinder output from all 47 species
Pir_g44088 No alias subgroup ERF-I transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g51434 CBF4, DREB1D transcription factor *(CBF/DREB1) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g17102 ERF2, ATERF2, ATERF-2 subgroup ERF-IX transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g09795 AtERF48, DREB2C subgroup ERF-IV/DREB2 transcription factor & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001285 No alias not classified & original description: CDS=1-1830 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005238 No alias subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015276 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0066.g016160 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original... 0.04 OrthoFinder output from all 47 species
Sam_g29719 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g32611 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g008880.3.1 CRF5, Solyc01g008880 transcription factor (ERF) 0.01 OrthoFinder output from all 47 species
Solyc01g090345.1.1 ATERF13, ERF13,... Ethylene-responsive transcription factor 13... 0.02 OrthoFinder output from all 47 species
Solyc03g005510.2.1 Solyc03g005510 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc03g116610.3.1 WIN1, SHN1,... transcription factor (ERF). SHN-type cutin and suberin... 0.03 OrthoFinder output from all 47 species
Solyc03g117230.1.1 Solyc03g117230 Ethylene-responsive transcription factor ERF084... 0.02 OrthoFinder output from all 47 species
Solyc05g052030.1.1 Solyc05g052030 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc06g051840.1.1 CRF4, Solyc06g051840 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc11g011750.1.1 ERF1, ATERF1,... transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Solyc12g008350.3.1 TINY2, Solyc12g008350 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Spa_g08637 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g54949 TINY2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06979 DREB26 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09252 TINY2 subgroup ERF-III transcription factor & original... 0.05 OrthoFinder output from all 47 species
Zm00001e006604_P001 ERF7, ATERF7,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e010195_P001 DREB1A, ATCBF3,... Dehydration-responsive element-binding protein 1A... 0.01 OrthoFinder output from all 47 species
Zm00001e013685_P001 ATERF4, RAP2.5,... no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Zm00001e014415_P001 TINY2, Zm00001e014415 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Zm00001e015328_P001 Zm00001e015328 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Zm00001e021579_P001 ERF7, ATERF7,... Pathogenesis-related genes transcriptional activator... 0.01 OrthoFinder output from all 47 species
Zm00001e022864_P001 ESR1, DRN, Zm00001e022864 transcription factor (ERF) 0.01 OrthoFinder output from all 47 species
Zm00001e032032_P001 ATERF12, ERF12,... transcription factor (ERF) 0.01 OrthoFinder output from all 47 species
Zm00001e032033_P001 ATERF-9, ERF9,... transcription factor (ERF) 0.01 OrthoFinder output from all 47 species
Zm00001e036130_P001 RAP2.4, Zm00001e036130 transcription factor (DREB) 0.05 OrthoFinder output from all 47 species
Zm00001e041288_P001 Zm00001e041288 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Zm00001e041620_P002 ATERF3, ERF3,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 33 83
No external refs found!