Ppi_g30465


Description : 2S globulin seed storage protein & original description: none


Gene families : OG0000380 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000380_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g30465
Cluster HCCA: Cluster_244

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00271140 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00023p00192280 evm_27.TU.AmTr_v1... Chitinase 1 OS=Tulipa bakeri 0.03 OrthoFinder output from all 47 species
Dcu_g29297 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g33452 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Gb_05578 No alias no description available(sp|q7m443|chit2_tulsb : 320.0) 0.03 OrthoFinder output from all 47 species
LOC_Os01g57390.1 LOC_Os01g57390 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os10g28120.1 LOC_Os10g28120 no description available(sp|q7m443|chit2_tulsb : 292.0) 0.04 OrthoFinder output from all 47 species
Ppi_g13030 No alias 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g28259 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0126.g021703 No alias 2S globulin seed storage protein & original description:... 0.06 OrthoFinder output from all 47 species
Zm00001e028945_P001 Zm00001e028945 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR018392 LysM_dom 157 199
IPR018392 LysM_dom 34 76
IPR018392 LysM_dom 92 134
IPR001223 Glyco_hydro18_cat 249 409
No external refs found!