Ppi_g30855 (ATCSLD2, CSLD2)

Aliases : ATCSLD2, CSLD2

Description : mannan synthase *(CSLD) & original description: none

Gene families : OG0000089 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000089_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ppi_g30855

Target	Alias	Description	ECC score	Gene Family Method
Aev_g09285	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g49400	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Als_g04490	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.02	OrthoFinder output from all 47 species
Als_g12758	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Aob_g11810	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g30416	MUR10, ATCESA7,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene23400.t1	ATCSLD3, KJK,...	mannan synthase *(CSLD) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene30179.t1	ATCSLD3, KJK,...	mannan synthase *(CSLD) & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene44196.t1	AtCESA1, RSW1,...	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Ceric.03G101000.1	ATCSLD3, KJK,...	mannan synthase *(CSLD) & original description:...	0.06	OrthoFinder output from all 47 species
Dde_g03999	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Ehy_g18189	ATCSLD2, CSLD2	mannan synthase *(CSLD) & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01006761001	ATCSLE1, CSLE1	Cellulose synthase-like protein E6 OS=Oryza sativa...	0.03	OrthoFinder output from all 47 species
GSVIVT01006764001	ATCSLE1, CSLE1	Cellulose synthase-like protein E6 OS=Oryza sativa...	0.04	OrthoFinder output from all 47 species
GSVIVT01006766001	ATCSLE1, CSLE1	Cellulose synthase-like protein E6 OS=Oryza sativa...	0.03	OrthoFinder output from all 47 species
GSVIVT01027717001	ATCSLG2, CSLG2	Cellulose synthase-like protein G2 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01030458001	CSLB04, ATCSLB4, ATCSLB04	Cellulose synthase-like protein H1 OS=Oryza sativa...	0.04	OrthoFinder output from all 47 species
Gb_02801	ATCSLD3, KJK, CSLD3	mannan synthase (CSLD)	0.04	OrthoFinder output from all 47 species
Gb_39671	ATCSLD3, KJK, CSLD3	mannan synthase (CSLD)	0.02	OrthoFinder output from all 47 species
LOC_Os04g35020.1	CSLB04, ATCSLB4,...	D-glucan synthase (CSLH)	0.02	OrthoFinder output from all 47 species
LOC_Os06g02180.1	ATCSLD3, KJK,...	mannan synthase (CSLD)	0.03	OrthoFinder output from all 47 species
Len_g02428	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.05	OrthoFinder output from all 47 species
MA_595526g0010	ATCSLD3, KJK, CSLD3	mannan synthase (CSLD)	0.02	OrthoFinder output from all 47 species
MA_745g0010	ATCSLD2, CSLD2	mannan synthase (CSLD)	0.03	OrthoFinder output from all 47 species
Nbi_g04994	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g31509	IXR1, CEV1,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Solyc03g097050.3.1	ATCSLD3, KJK,...	mannan synthase (CSLD)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008194	UDP-glycosyltransferase activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009250	glucan biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	None	Extended
MF	GO:0016758	hexosyltransferase activity	None	Extended
MF	GO:0016759	cellulose synthase activity	None	Extended
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEA	Interproscan
BP	GO:0030243	cellulose metabolic process	None	Extended
BP	GO:0030244	cellulose biosynthetic process	IEA	Interproscan
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
MF	GO:0035251	UDP-glucosyltransferase activity	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
BP	GO:0051273	beta-glucan metabolic process	None	Extended
BP	GO:0051274	beta-glucan biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
BP	GO:0006355	regulation of DNA-templated transcription	IEP	HCCA
BP	GO:0009889	regulation of biosynthetic process	IEP	HCCA
BP	GO:0010468	regulation of gene expression	IEP	HCCA
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0019222	regulation of metabolic process	IEP	HCCA
BP	GO:0031323	regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	HCCA
BP	GO:0048193	Golgi vesicle transport	IEP	HCCA
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051252	regulation of RNA metabolic process	IEP	HCCA
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0080090	regulation of primary metabolic process	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	HCCA
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005150	Cellulose_synth	377	1141

External Links

No external refs found!

Ppi_g30855 (ATCSLD2, CSLD2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation