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  5. Ppi_g31981

Ppi_g31981 (PAB2, PABP2, ATPAB2)


Aliases : PAB2, PABP2, ATPAB2

Description : mRNA poly-A-tail binding factor *(PABP) & original description: none


Gene families : OG0000326 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000326_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g31981

Target Alias Description ECC score Gene Family Method Actions
Als_g39199 PAB2, PABP2, ATPAB2 mRNA poly-A-tail binding factor *(PABP) & original... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021244.19 PAB2, PABP2, ATPAB2 Protein biosynthesis.translation initiation.mRNA... 0.02 OrthoFinder output from all 47 species
Cre01.g039300 PAB8, PABP8 Protein biosynthesis.translation initiation.mRNA... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 290 356
IPR000504 RRM_dom 191 259
IPR000504 RRM_dom 100 167
IPR000504 RRM_dom 12 81
No external refs found!