Aliases : HAF01, HAC13, TAF1, HAF1, GTD1
Description : component *(HAF/TAF1) of SAGA transcription co-activator complex & original description: none
Gene families : OG0003088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003088_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00078p00132750 | HAF01, HAC13,... | Protein modification.phosphorylation.atypical kinase... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G32750 | HAF01, HAC13,... | HAC13 protein (HAC13) | 0.07 | OrthoFinder output from all 47 species | |
| Adi_g086241 | HAF01, HAC13,... | component *(HAF/TAF1) of SAGA transcription co-activator... | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g16440 | HAF01, HAC13,... | component *(HAF/TAF1) of SAGA transcription co-activator... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g25268 | HAF01, HAC13,... | component *(HAF/TAF1) of SAGA transcription co-activator... | 0.04 | OrthoFinder output from all 47 species | |
| Als_g23531 | HAF01, HAC13,... | component *(HAF/TAF1) of SAGA transcription co-activator... | 0.05 | OrthoFinder output from all 47 species | |
| Als_g30416 | HAF01, HAC13,... | component *(HAF/TAF1) of SAGA transcription co-activator... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g13570 | HAF01, HAC13,... | component *(HAF/TAF1) of SAGA transcription co-activator... | 0.06 | OrthoFinder output from all 47 species | |
| Azfi_s0007.g011150 | HAF01, HAC13,... | component *(HAF/TAF1) of SAGA transcription co-activator... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.20G008000.1 | HAF01, HAC13,... | component *(HAF/TAF1) of SAGA transcription co-activator... | 0.05 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020903.20 | HAF01, HAC13,... | RNA biosynthesis.RNA polymerase II-dependent... | 0.01 | OrthoFinder output from all 47 species | |
| Cre10.g425501 | HAF01, HAC13,... | Transcription initiation factor TFIID subunit 1 OS=Oryza... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g03217 | HAF01, HAC13,... | component *(HAF/TAF1) of SAGA transcription co-activator... | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g29129 | HAF01, HAC13,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01020528001 | HAF01, HAC13,... | Protein modification.phosphorylation.atypical kinase... | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os06g43790.1 | HAF01, HAC13,... | component HAF/TAF1 of SAGA transcription co-activator... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g06767 | HAF01, HAC13,... | component *(HAF/TAF1) of SAGA transcription co-activator... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g14379 | HAF01, HAC13,... | component *(HAF/TAF1) of SAGA transcription co-activator... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g04821 | HAF01, HAC13,... | component *(HAF/TAF1) of SAGA transcription co-activator... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g40406 | TAF1B, TAF1, HAF2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g10966 | HAF01, HAC13,... | component *(HAF/TAF1) of SAGA transcription co-activator... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g37859 | No alias | component *(HAF/TAF1) of SAGA transcription co-activator... | 0.04 | OrthoFinder output from all 47 species | |
| Smo409957 | HAF01, HAC13,... | Protein modification.phosphorylation.atypical kinase... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc07g006820.4.1 | HAF01, HAC13,... | component HAF/TAF1 of SAGA transcription co-activator... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g55054 | HAF01, HAC13,... | component *(HAF/TAF1) of SAGA transcription co-activator... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g11474 | HAF01, HAC13,... | component *(HAF/TAF1) of SAGA transcription co-activator... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e037464_P001 | HAF01, HAC13,... | component HAF/TAF1 of SAGA transcription co-activator... | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0000213 | tRNA-intron endonuclease activity | IEP | HCCA |
| BP | GO:0000394 | RNA splicing, via endonucleolytic cleavage and ligation | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003689 | DNA clamp loader activity | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | HCCA |
| MF | GO:0003917 | DNA topoisomerase type I (single strand cut, ATP-independent) activity | IEP | HCCA |
| MF | GO:0004518 | nuclease activity | IEP | HCCA |
| MF | GO:0004519 | endonuclease activity | IEP | HCCA |
| MF | GO:0004521 | endoribonuclease activity | IEP | HCCA |
| MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
| MF | GO:0004549 | tRNA-specific ribonuclease activity | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| CC | GO:0005663 | DNA replication factor C complex | IEP | HCCA |
| CC | GO:0005694 | chromosome | IEP | HCCA |
| CC | GO:0005744 | TIM23 mitochondrial import inner membrane translocase complex | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006260 | DNA replication | IEP | HCCA |
| BP | GO:0006265 | DNA topological change | IEP | HCCA |
| BP | GO:0006388 | tRNA splicing, via endonucleolytic cleavage and ligation | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006839 | mitochondrial transport | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| BP | GO:0006996 | organelle organization | IEP | HCCA |
| BP | GO:0008033 | tRNA processing | IEP | HCCA |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
| MF | GO:0008170 | N-methyltransferase activity | IEP | HCCA |
| MF | GO:0008276 | protein methyltransferase activity | IEP | HCCA |
| BP | GO:0008380 | RNA splicing | IEP | HCCA |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0016043 | cellular component organization | IEP | HCCA |
| MF | GO:0016278 | lysine N-methyltransferase activity | IEP | HCCA |
| MF | GO:0016279 | protein-lysine N-methyltransferase activity | IEP | HCCA |
| MF | GO:0016892 | endoribonuclease activity, producing 3'-phosphomonoesters | IEP | HCCA |
| MF | GO:0016894 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0018024 | histone lysine N-methyltransferase activity | IEP | HCCA |
| BP | GO:0030150 | protein import into mitochondrial matrix | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| BP | GO:0033365 | protein localization to organelle | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0042054 | histone methyltransferase activity | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0044743 | protein transmembrane import into intracellular organelle | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0051276 | chromosome organization | IEP | HCCA |
| BP | GO:0065002 | intracellular protein transmembrane transport | IEP | HCCA |
| BP | GO:0070585 | protein localization to mitochondrion | IEP | HCCA |
| BP | GO:0071103 | DNA conformation change | IEP | HCCA |
| BP | GO:0071806 | protein transmembrane transport | IEP | HCCA |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
| BP | GO:0072594 | establishment of protein localization to organelle | IEP | HCCA |
| BP | GO:0072655 | establishment of protein localization to mitochondrion | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| CC | GO:0098798 | mitochondrial protein-containing complex | IEP | HCCA |
| CC | GO:0098800 | inner mitochondrial membrane protein complex | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1990542 | mitochondrial transmembrane transport | IEP | HCCA |
| No external refs found! |
