Aliases : REME1
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ppi_g33539 | |
| Cluster | HCCA: Cluster_247 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G05750 | PDE247, CLB19 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT2G39620 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g025491 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g055707 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g067225 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g069271 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g098232 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g100956 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g30904 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g46730 | CRR2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g26992 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g37552 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g20313 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene01654.t1 | PTAC9, OSB2,... | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene13980.t1 | Aspi01Gene13980 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0028.g023878 | No alias | not classified & original description: CDS=1-2883 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0035.g025580 | No alias | not classified & original description: CDS=174-2462 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0117.g046569 | No alias | not classified & original description: CDS=1-2520 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g12399 | DOT4 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.12G030100.1 | Ceric.12G030100 | not classified & original description: pacid=50600629... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.15G051800.1 | VAC1, ECB2,... | not classified & original description: pacid=50639747... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.30G012500.1 | Ceric.30G012500 | not classified & original description: pacid=50608997... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g21707 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g04286 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g09099 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g13383 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g15555 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g15898 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g22168 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g22601 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g23517 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g25147 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g27009 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g29998 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g09988 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01021403001 | No alias | Pentatricopeptide repeat-containing protein At3g14730... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_07914 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g11470.1 | LOC_Os01g11470 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g09800.1 | OTP82, LOC_Os02g09800 | Pentatricopeptide repeat-containing protein At1g08070,... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g60200.1 | LOC_Os03g60200 | Pentatricopeptide repeat-containing protein At2g41080... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g30755 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g33754 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g44148 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g07406 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07780 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g07850 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g16407 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g33937 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g11358 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g43705 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g46446 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g03854 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g06282 | MEF22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g30106 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g14064 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g21836 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g30445 | REME1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g35461 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g43620 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g18013 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g57069 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g22621 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g12943 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g42752 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g53970 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g54174 | EMB2261 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0007.g003613 | No alias | not classified & original description: CDS=279-3914 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0013.g005807 | No alias | not classified & original description: CDS=1-2844 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0015.g006560 | No alias | not classified & original description: CDS=1-2253 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0016.g006956 | No alias | not classified & original description: CDS=1-2820 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0026.g009590 | No alias | not classified & original description: CDS=1-2562 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0035.g011483 | No alias | not classified & original description: CDS=1-2124 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0044.g013068 | No alias | not classified & original description: CDS=1-1464 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0096.g019387 | REME1 | not classified & original description: CDS=1-1161 | 0.06 | OrthoFinder output from all 47 species | |
| Sam_g05036 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g24796 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g27561 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g30207 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g35776 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g36251 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g43933 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g45851 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo228785 | No alias | Pentatricopeptide repeat-containing protein At2g33680... | 0.03 | OrthoFinder output from all 47 species | |
| Smo399 | No alias | Pentatricopeptide repeat-containing protein At3g03580... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g10948 | MEF22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e039305_P001 | Zm00001e039305 | RNA editing factor (MEF13) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | HCCA |
| MF | GO:0016881 | acid-amino acid ligase activity | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| MF | GO:0044183 | protein folding chaperone | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0140662 | ATP-dependent protein folding chaperone | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| No external refs found! |
