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  5. Ppi_g33772

Ppi_g33772


Description : component *(uL24c) of large plastid ribosomal-subunit proteome & original description: none


Gene families : OG0006569 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006569_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g33772
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
AT5G54600 No alias Translation protein SH3-like family protein 0.02 OrthoFinder output from all 47 species
Als_g04734 No alias component *(uL24c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Aspi01Gene42449.t1 Aspi01Gene42449 component *(uL24c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
LOC_Os06g46930.1 LOC_Os06g46930 component psRPL24 of large ribosomal subunit proteome 0.02 OrthoFinder output from all 47 species
Len_g05147 No alias component *(uL24c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Mp3g07850.1 No alias component psRPL24 of large ribosomal subunit proteome 0.02 OrthoFinder output from all 47 species
Nbi_g00588 No alias component *(uL24c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Ore_g05626 No alias component *(uL24c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0071.g016787 No alias component *(uL24c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Solyc07g063960.3.1 Solyc07g063960 component psRPL24 of large ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
Zm00001e013043_P001 Zm00001e013043 component psRPL24 of large ribosomal subunit proteome 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005778 peroxisomal membrane IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016559 peroxisome fission IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
CC GO:0031903 microbody membrane IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
CC GO:0042579 microbody IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003256 Ribosomal_L24 112 175
IPR005824 KOW 79 110
No external refs found!