Aliases : AtLa1, La1
Description : nascent RNA chaperone *(LA) & original description: none
Gene families : OG0003172 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003172_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00109p00056900 | AtLa1, La1,... | La protein 1 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| AT4G32720 | AtLa1, La1 | La protein 1 | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g012248 | AtLa1, La1 | nascent RNA chaperone *(LA) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g11552 | AtLa1, La1 | nascent RNA chaperone *(LA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g11426 | AtLa1, La1 | nascent RNA chaperone *(LA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g08492 | AtLa1, La1 | nascent RNA chaperone *(LA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.26G010200.1 | AtLa1, La1,... | nascent RNA chaperone *(LA) & original description:... | 0.06 | OrthoFinder output from all 47 species | |
| Dac_g09267 | AtLa1, La1 | nascent RNA chaperone *(LA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g11687 | AtLa1, La1 | nascent RNA chaperone *(LA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g42010.1 | AtLa1, La1,... | RNA chaperone (LA). rRNA chaperone (IRP2) | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g25839 | AtLa1, La1 | nascent RNA chaperone *(LA) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| MA_78251g0010 | AtLa1, La1 | La protein 1 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| Mp1g04820.1 | AtLa1, La1 | RNA chaperone (LA). rRNA chaperone (IRP2) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc08g068310.3.1 | AtLa1, La1,... | RNA chaperone (LA). rRNA chaperone (IRP2) | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g09674 | AtLa1, La1 | nascent RNA chaperone *(LA) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g31164 | AtLa1, La1 | nascent RNA chaperone *(LA) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e041151_P001 | AtLa1, La1,... | RNA chaperone (LA). rRNA chaperone (IRP2) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000149 | SNARE binding | IEP | HCCA |
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
| MF | GO:0003924 | GTPase activity | IEP | HCCA |
| MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| MF | GO:0005525 | GTP binding | IEP | HCCA |
| CC | GO:0005643 | nuclear pore | IEP | HCCA |
| CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | HCCA |
| BP | GO:0006413 | translational initiation | IEP | HCCA |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | HCCA |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
| MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
| MF | GO:0017056 | structural constituent of nuclear pore | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
| MF | GO:0019905 | syntaxin binding | IEP | HCCA |
| MF | GO:0031369 | translation initiation factor binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| MF | GO:0045182 | translation regulator activity | IEP | HCCA |
| BP | GO:0046907 | intracellular transport | IEP | HCCA |
| BP | GO:0051169 | nuclear transport | IEP | HCCA |
| BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| No external refs found! |
