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  5. Ppi_g35775

Ppi_g35775


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g35775
Cluster HCCA: Cluster_222

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00076010 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
AMTR_s00046p00214930 CRR22,... Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
AT1G47580 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G57430 OTP84 Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g012320 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g056891 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g069188 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g089353 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g44730 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g12943 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13233 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06720 OTP82 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g14142 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30880 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g62348 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g12691 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g36874 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37112 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37552 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g43028 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g17248 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68030 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene13883.t1 Aspi01Gene13883 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene24113.t1 VAC1, ECB2,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene55960.t1 SLO1, Aspi01Gene55960 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0072.g036887 EMB2758 not classified & original description: CDS=1-1161 0.03 OrthoFinder output from all 47 species
Azfi_s0301.g063681 REME1 not classified & original description: CDS=1-1416 0.03 OrthoFinder output from all 47 species
Cba_g04060 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05314 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05970 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06861 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g13970 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19570 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g27620 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g66834 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67460 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.10G062000.1 Ceric.10G062000 ssDNA-binding protein *(OSB) & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g20874 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g30454 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g39198 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g10377 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g21154 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g40976 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g50134 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22314 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23602 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g28151 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g29998 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46872 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50252 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13325 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g16748 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17701 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g18446 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26396 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000719001 OSB1 Cell cycle.organelle machineries.DNA... 0.02 OrthoFinder output from all 47 species
GSVIVT01008407001 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
GSVIVT01009227001 CRR22 Pentatricopeptide repeat-containing protein At2g22070... 0.02 OrthoFinder output from all 47 species
GSVIVT01013023001 No alias Pentatricopeptide repeat-containing protein At1g31920... 0.03 OrthoFinder output from all 47 species
GSVIVT01031251001 LPA66 Pentatricopeptide repeat-containing protein At5g48910... 0.02 OrthoFinder output from all 47 species
GSVIVT01033190001 OTP82 Pentatricopeptide repeat-containing protein At5g66520... 0.03 OrthoFinder output from all 47 species
LOC_Os01g42280.1 CRR21, LOC_Os01g42280 RNA editing factor (CRR21) 0.03 OrthoFinder output from all 47 species
LOC_Os11g29230.1 CRR22, LOC_Os11g29230 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
Len_g03404 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g07474 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g10412 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g12219 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18279 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18293 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18975 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g23407 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g36973 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g41147 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g43898 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03408 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g05719 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06160 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06599 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06708 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07291 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g08420 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g08720 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g11306 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32919 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g35996 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g38215 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_14381g0010 EMB2758 Pentatricopeptide repeat-containing protein At3g12770... 0.02 OrthoFinder output from all 47 species
Msp_g22928 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g43460 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g07302 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g13578 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g13990 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g15172 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15841 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g20419 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g24060 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g28131 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g41736 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g44663 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g02438 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g12551 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g16479 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g17481 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g27115 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30748 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43142 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13627 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g32476 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57723 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57997 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63633 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63660 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63866 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63873 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g12264 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13926 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14437 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g33128 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53962 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001739 No alias not classified & original description: CDS=1-1443 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002062 No alias not classified & original description: CDS=1-1716 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g002988 No alias not classified & original description: CDS=1-2412 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003208 No alias monogalactosyldiacylglycerol lipase *(HIL1) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004036 OTP84 not classified & original description: CDS=1-1773 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004510 No alias not classified & original description: CDS=121-2523 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005856 No alias not classified & original description: CDS=1-2292 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005911 EMB2758 not classified & original description: CDS=1-2163 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007046 No alias not classified & original description: CDS=1-2853 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007537 No alias not classified & original description: CDS=117-2237 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008337 No alias not classified & original description: CDS=1-3675 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0028.g009863 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2568 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0089.g018665 No alias not classified & original description: CDS=8-2563 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0144.g022971 No alias not classified & original description: CDS=343-1173 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0215.g026034 OTP84 not classified & original description: CDS=2081-4369 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0244.g026675 No alias not classified & original description: CDS=1-1575 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0260.g026882 No alias not classified & original description: CDS=1-687 0.03 OrthoFinder output from all 47 species
Sam_g01747 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16320 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16542 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g33428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo5521 No alias Pentatricopeptide repeat-containing protein At4g30700... 0.02 OrthoFinder output from all 47 species
Solyc01g007850.2.1 Solyc01g007850 Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Solyc02g081900.4.1 OTP84, Solyc02g081900 RNA editing factor (OTP84) 0.03 OrthoFinder output from all 47 species
Solyc04g076800.3.1 CRR22, Solyc04g076800 Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Solyc05g013200.1.1 OTP85, Solyc05g013200 RNA editing factor (OTP85) 0.02 OrthoFinder output from all 47 species
Solyc08g013850.1.1 CRR21, Solyc08g013850 RNA editing factor (CRR21) 0.02 OrthoFinder output from all 47 species
Solyc11g017370.3.1 Solyc11g017370 RNA editing factor (AEF1) 0.05 OrthoFinder output from all 47 species
Spa_g01958 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g04429 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g09284 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g09940 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14289 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15749 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g16117 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g17876 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g20189 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23616 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g46875 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08462 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21261 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g44081 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e003605_P001 DOT4, Zm00001e003605 Pentatricopeptide repeat-containing protein DOT4,... 0.04 OrthoFinder output from all 47 species
Zm00001e021457_P001 CRR22, Zm00001e021457 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
Zm00001e029186_P001 Zm00001e029186 Pentatricopeptide repeat-containing protein At1g19720... 0.02 OrthoFinder output from all 47 species
Zm00001e030605_P001 Zm00001e030605 Pentatricopeptide repeat-containing protein At1g31430... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 245 276
IPR002885 Pentatricopeptide_repeat 152 174
IPR002885 Pentatricopeptide_repeat 75 123
IPR002885 Pentatricopeptide_repeat 178 225
No external refs found!