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  5. Aev_g11596

Aev_g11596


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g11596
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
Adi_g004364 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g007107 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g32661 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g34486 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18971 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26861 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g20395 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g36101 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g25195 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g30728 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene44451.t2 Aspi01Gene44451 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0002.g001450 No alias not classified & original description: CDS=1-3192 0.03 OrthoFinder output from all 47 species
Azfi_s0061.g035099 No alias not classified & original description: CDS=1-2613 0.03 OrthoFinder output from all 47 species
Azfi_s0081.g038617 OTP86 not classified & original description: CDS=1-2295 0.03 OrthoFinder output from all 47 species
Cba_g07378 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g11909 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20483 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g26795 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29842 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29942 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g34546 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g35128 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g46020 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67793 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g74881 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001130.28 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g18724 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g31749 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g45717 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g36056 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g37654 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g40777 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g42218 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g45933 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g50102 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g23679 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g25586 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26705 CRR21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g27009 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g40646 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_03345 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Len_g50883 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g54668 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07335 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g17734 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g17740 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g18240 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g25014 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g28205 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28217 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28804 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g29683 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g34152 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g40180 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g42980 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g44071 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g45075 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g45757 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g45870 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g46846 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g48539 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04397 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g05398 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g05809 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g21730 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g10372 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g19567 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63804 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g18927 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29583 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53953 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g59333 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g33092 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g50768 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo131810 CRR22 Pentatricopeptide repeat-containing protein At3g09040,... 0.03 OrthoFinder output from all 47 species
Solyc01g100340.4.1 Solyc01g100340 Pentatricopeptide repeat-containing protein At1g09190... 0.03 OrthoFinder output from all 47 species
Solyc06g062610.2.1 Solyc06g062610 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Solyc09g065710.1.1 OTP86, Solyc09g065710 RNA editing factor (OTP86) 0.03 OrthoFinder output from all 47 species
Tin_g03804 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g04965 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13476 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g28482 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g44215 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44227 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e039305_P001 Zm00001e039305 RNA editing factor (MEF13) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000491 small nucleolar ribonucleoprotein complex assembly IEP HCCA
BP GO:0000492 box C/D snoRNP assembly IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR046848 E_motif 91 153
IPR002885 Pentatricopeptide_repeat 50 72
IPR002885 Pentatricopeptide_repeat 12 38
IPR046849 Eplus_motif 158 182
IPR032867 DYW_dom 189 281
No external refs found!