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  5. Ppi_g39212

Ppi_g39212 (RHD6)


Aliases : RHD6

Description : bHLH-type transcription factor & original description: none


Gene families : OG0000019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g39212
Cluster HCCA: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00267570 UNE12,... RNA biosynthesis.transcriptional activation.bHLH... 0.06 OrthoFinder output from all 47 species
AMTR_s00133p00027110 BPEp, ZCW32,... External stimuli response.light.UV-A/blue... 0.02 OrthoFinder output from all 47 species
AT1G10120 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G29950 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G07340 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G23690 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
AT4G36540 BEE2 BR enhanced expression 2 0.02 OrthoFinder output from all 47 species
AT5G48560 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G50915 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G62610 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g012121 HEC2 bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g085081 No alias regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
Adi_g088431 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Adi_g115453 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g10642 LRL1 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g14326 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Aev_g23312 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g10601 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g33936 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g01540 CIB1 regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Als_g08145 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Als_g22777 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g28177 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Als_g32315 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g49595 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g10628 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g21168 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g32490 RSL2 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g14421 CIB1 regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Aop_g21794 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene01266.t1 SPT, Aspi01Gene01266 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene04163.t2 Aspi01Gene04163 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene12606.t2 Aspi01Gene12606 regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene43314.t1 CIB1, Aspi01Gene43314 regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene46202.t1 Aspi01Gene46202 regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene54623.t1 LRL3, Aspi01Gene54623 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0038.g026209 No alias bHLH-type transcription factor & original description:... 0.01 OrthoFinder output from all 47 species
Azfi_s0056.g034059 RHD6 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Azfi_s0113.g045847 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Azfi_s0319.g064443 RSL2 bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Cba_g15803 No alias regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
Ceric.04G038900.1 LRL3, Ceric.04G038900 bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.08G020500.1 RSL2, Ceric.08G020500 bHLH-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.14G055200.1 RSL2, Ceric.14G055200 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.16G014000.1 RHD6, Ceric.16G014000 bHLH-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.16G026700.1 Ceric.16G026700 regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Ceric.19G069900.1 LRL3, Ceric.19G069900 bHLH-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.1Z049600.1 Ceric.1Z049600 regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Ceric.21G084700.1 PIF3, POC1,... bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.22G074300.1 Ceric.22G074300 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.28G002800.1 Ceric.28G002800 regulatory protein (CIB) of blue light perception &... 0.05 OrthoFinder output from all 47 species
Ceric.32G068300.1 Ceric.32G068300 regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Ceric.34G030200.1 BPEp, ZCW32,... regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Dac_g03262 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g07111 No alias regulatory protein (CIB) of blue light perception &... 0.05 OrthoFinder output from all 47 species
Dac_g07379 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g16940 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Dac_g31685 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Dcu_g05640 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g25483 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g26546 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Dde_g43893 HEC1 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02749 PIL5, PIF1 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g05277 HEC2 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g05791 No alias regulatory protein (CIB) of blue light perception &... 0.07 OrthoFinder output from all 47 species
Ehy_g29687 PIL5, PIF1 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008628001 No alias External stimuli response.light.UV-A/blue... 0.02 OrthoFinder output from all 47 species
GSVIVT01013553001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
GSVIVT01018942001 CIB1 External stimuli response.light.UV-A/blue... 0.02 OrthoFinder output from all 47 species
GSVIVT01032055001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
Gb_33185 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
LOC_Os01g02110.1 RHD6, LOC_Os01g02110 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
LOC_Os01g67480.1 LOC_Os01g67480 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
LOC_Os01g68700.1 LOC_Os01g68700 transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
LOC_Os02g47660.1 CIB1, LOC_Os02g47660 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
LOC_Os08g41320.1 LOC_Os08g41320 transcription factor (bHLH). transcriptional regulator (CIB) 0.01 OrthoFinder output from all 47 species
LOC_Os09g32510.1 LOC_Os09g32510 transcription factor (bHLH). transcriptional regulator (CIB) 0.01 OrthoFinder output from all 47 species
LOC_Os11g25560.1 LOC_Os11g25560 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
Len_g10068 No alias regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
Len_g13542 No alias regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
Len_g35329 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Lfl_g08868 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Lfl_g20995 BPEp, ZCW32, BPE, BPEub regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Lfl_g21331 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Lfl_g37660 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Lfl_g38961 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Lfl_g39480 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_10435000g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_158362g0010 CIB5 transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
MA_42080g0010 CIB1 transcription factor (bHLH). transcriptional regulator (CIB) 0.04 OrthoFinder output from all 47 species
Mp6g18480.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
Mpzg01410.1 LRL3 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Msp_g15574 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g24041 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Msp_g43243 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03137 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Nbi_g03697 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09354 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Nbi_g11730 No alias regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
Nbi_g16755 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g19103 CIB1 regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Nbi_g25662 CIB1 regulatory protein (CIB) of blue light perception &... 0.05 OrthoFinder output from all 47 species
Pir_g07604 No alias regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
Pir_g10832 LRL3 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g38111 No alias regulatory protein (CIB) of blue light perception &... 0.05 OrthoFinder output from all 47 species
Pnu_g08374 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g21397 RSL4 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c20_590V3.1 CIB5, Pp3c20_590 cryptochrome-interacting basic-helix-loop-helix 5 0.01 OrthoFinder output from all 47 species
Ppi_g28847 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003783 No alias bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0038.g011925 HEC2 bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Sam_g48191 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g51492 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Smo413232 RHD6 RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
Smo425336 LRL1 RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
Smo444782 LRL2 RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
Solyc01g010130.4.1 Solyc01g010130 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
Solyc02g091440.2.1 RHD6, Solyc02g091440 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Solyc03g113560.4.1 Solyc03g113560 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Solyc03g121240.1.1 Solyc03g121240 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Solyc07g005400.3.1 LRL1, Solyc07g005400 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Solyc12g098620.2.1 Solyc12g098620 transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
Solyc12g100140.3.1 Solyc12g100140 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Spa_g05058 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Spa_g09944 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Spa_g26616 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g37930 No alias regulatory protein (CIB) of blue light perception &... 0.05 OrthoFinder output from all 47 species
Spa_g41645 RHD6 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g41791 LRL3 bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g50491 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g16970 CIB1 regulatory protein (CIB) of blue light perception &... 0.05 OrthoFinder output from all 47 species
Tin_g19138 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Tin_g45190 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e000921_P005 Zm00001e000921 transcription factor (bHLH). transcriptional regulator (CIB) 0.01 OrthoFinder output from all 47 species
Zm00001e011084_P002 Zm00001e011084 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
Zm00001e011410_P001 Zm00001e011410 transcription factor (bHLH). transcriptional regulator (CIB) 0.01 OrthoFinder output from all 47 species
Zm00001e015610_P001 RHD6, Zm00001e015610 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e019392_P001 Zm00001e019392 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e025656_P001 RHD6, Zm00001e025656 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e034605_P003 Zm00001e034605 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
Zm00001e035219_P001 Zm00001e035219 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e035422_P001 RSL4, Zm00001e035422 transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
Zm00001e036318_P001 LRL1, Zm00001e036318 transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
Zm00001e036408_P003 SPT, Zm00001e036408 transcription factor (bHLH) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 509 549
No external refs found!