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  5. Ppi_g39675

Ppi_g39675


Description : not classified & original description: none


Gene families : OG0000527 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000527_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g39675
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
Ala_g08034 FBW2 substrate adaptor *(SKIP18) of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Aspi01Gene29438.t1 FBW2, Aspi01Gene29438 substrate adaptor *(SKIP18) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Cba_g24792 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g12383 No alias substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.03 OrthoFinder output from all 47 species
Dde_g26536 FBW2 substrate adaptor *(SKIP18) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Len_g29455 FBW2 substrate adaptor *(SKIP18) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Mp3g07000.1 No alias component F-box of SCF E3 ubiquitin ligase complex 0.02 OrthoFinder output from all 47 species
Mp5g21020.1 No alias F-box protein SKIP1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Pnu_g10732 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g16969 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g52224 FBW2 substrate adaptor *(SKIP18) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Smo35457 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Solyc08g013780.1.1 Solyc08g013780 Putative F-box/LRR-repeat protein 23 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc08g013790.2.1 Solyc08g013790 F-box protein SKIP19 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g28262 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030151 molybdenum ion binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
CC GO:0030286 dynein complex IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 26 65
No external refs found!