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  5. Aev_g12072

Aev_g12072


Description : tRNA guanine-methyltransferase *(TRM5) & original description: none


Gene families : OG0002428 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002428_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g12072

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00072p00056850 evm_27.TU.AmTr_v1... RNA processing.RNA modification.rRNA/tRNA... 0.03 OrthoFinder output from all 47 species
AT3G56120 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.02 OrthoFinder output from all 47 species
Ala_g07186 No alias tRNA guanine-methyltransferase *(TRM5) & original... 0.03 OrthoFinder output from all 47 species
Aob_g02057 No alias tRNA guanine-methyltransferase *(TRM5) & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0355.g066697 No alias not classified & original description: CDS=80-1498 0.03 OrthoFinder output from all 47 species
Cba_g31438 No alias tRNA guanine-methyltransferase *(TRM5) & original... 0.04 OrthoFinder output from all 47 species
Dac_g22669 No alias tRNA guanine-methyltransferase *(TRM5) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g51008 No alias tRNA guanine-methyltransferase *(TRM5) & original... 0.05 OrthoFinder output from all 47 species
GSVIVT01014467001 No alias RNA processing.RNA modification.rRNA/tRNA... 0.03 OrthoFinder output from all 47 species
Len_g01297 No alias tRNA guanine-methyltransferase *(TRM5) & original... 0.03 OrthoFinder output from all 47 species
Len_g31355 No alias tRNA guanine-methyltransferase *(TRM5) & original... 0.04 OrthoFinder output from all 47 species
Msp_g11894 No alias tRNA guanine-methyltransferase *(TRM5) & original... 0.02 OrthoFinder output from all 47 species
Ore_g26437 No alias tRNA guanine-methyltransferase *(TRM5) & original... 0.03 OrthoFinder output from all 47 species
Pir_g59925 No alias tRNA guanine-methyltransferase *(TRM5) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g17379 No alias tRNA guanine-methyltransferase *(TRM5) & original... 0.06 OrthoFinder output from all 47 species
Sam_g09681 No alias tRNA guanine-methyltransferase *(TRM5) & original... 0.02 OrthoFinder output from all 47 species
Sam_g12584 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g49365 No alias tRNA guanine-methyltransferase *(TRM5) & original... 0.02 OrthoFinder output from all 47 species
Spa_g56615 No alias tRNA guanine-methyltransferase *(TRM5) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
InterPro domains Description Start Stop
IPR030382 MeTrfase_TRM5/TYW2 358 555
No external refs found!