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  5. Ppi_g41587

Ppi_g41587


Description : not classified & original description: none


Gene families : OG0000143 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000143_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g41587
Cluster HCCA: Cluster_223

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00212610 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00099p00033600 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Adi_g003209 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g011111 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g019139 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g056039 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g060889 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g113655 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g116152 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g03142 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g28669 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g27616 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g15434 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g31327 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04836 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g63912 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene23855.t1 Aspi01Gene23855 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0035.g025546 No alias not classified & original description: CDS=508-1674 0.03 OrthoFinder output from all 47 species
Azfi_s0095.g043558 No alias not classified & original description: CDS=525-2087 0.05 OrthoFinder output from all 47 species
Cba_g17291 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g45592 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.38G003400.1 Ceric.38G003400 not classified & original description: pacid=50580583... 0.03 OrthoFinder output from all 47 species
Cre07.g348350 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g04659 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g29952 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g43811 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04844 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g05511 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17287 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_28132 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_34690 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os10g28210.1 LOC_Os10g28210 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os11g25020.1 LOC_Os11g25020 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g29121 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g29105 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_132127g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_29449g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_32290g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_41471g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g06137 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g34113 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g26680 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g15663 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001909 No alias not classified & original description: CDS=1-747 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003040 No alias not classified & original description: CDS=1-1485 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008363 No alias not classified & original description: CDS=285-1409 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014461 No alias not classified & original description: CDS=1-1647 0.04 OrthoFinder output from all 47 species
Sam_g11927 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g40584 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g078160.3.1 Solyc02g078160 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc06g005480.3.1 Solyc06g005480 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc06g007580.1.1 Solyc06g007580 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g07042 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g41694 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14496 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000474_P001 Zm00001e000474 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e004776_P001 Zm00001e004776 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e005992_P006 Zm00001e005992 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006502 PDDEXK-like 48 280
No external refs found!