Aliases : 4CL3
Description : EC_6.2 ligase forming carbon-sulfur bond & original description: none
Gene families : OG0000673 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000673_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ppi_g42937 | |
| Cluster | HCCA: Cluster_234 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G51680 | 4CL1, AT4CL1, 4CL.1 | 4-coumarate:CoA ligase 1 | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g103472 | AT4CL2, 4CL2 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.17G083800.1 | AT4CL2, 4CL2,... | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g07445 | 4CL3 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g09728 | 4CL3 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g24331 | 4CL3 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g31145 | ACOS5 | acyl-CoA synthetase *(ACS5) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g31505 | 4CL3 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01010497001 | ACOS5 | Cell wall.sporopollenin.synthesis.ACS5 acyl-CoA synthetase | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01029182001 | 4CL1, AT4CL1, 4CL.1 | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01029183001 | AT4CL2, 4CL2 | 4-coumarate--CoA ligase 1 OS=Nicotiana tabacum | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g06994 | AT4CL2, 4CL2 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.03 | OrthoFinder output from all 47 species | |
| Mp5g01200.1 | 4CL1, AT4CL1, 4CL.1 | p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g00641 | 4CL1, AT4CL1, 4CL.1 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g32420 | 4CL1, AT4CL1, 4CL.1 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0149.g023264 | 4CL1, AT4CL1, 4CL.1 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc03g097030.3.1 | 4CL3, Solyc03g097030 | p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g07084 | 4CL3 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g07442 | 4CL3 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g11239 | ACOS5 | acyl-CoA synthetase *(ACS5) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e013798_P002 | 4CL1, AT4CL1,... | p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003774 | cytoskeletal motor activity | IEP | HCCA |
| MF | GO:0003777 | microtubule motor activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0007017 | microtubule-based process | IEP | HCCA |
| BP | GO:0007018 | microtubule-based movement | IEP | HCCA |
| MF | GO:0008017 | microtubule binding | IEP | HCCA |
| MF | GO:0008092 | cytoskeletal protein binding | IEP | HCCA |
| MF | GO:0015631 | tubulin binding | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| No external refs found! |
