Aev_g12277

Description : pectin methylesterase & original description: none

Gene families : OG0000083 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aev_g12277

Target	Alias	Description	ECC score	Gene Family Method
AT5G47500	No alias	Pectin lyase-like superfamily protein	0.02	OrthoFinder output from all 47 species
Ala_g16581	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.24G024700.1	Ceric.24G024700	pectin methylesterase & original description:...	0.03	OrthoFinder output from all 47 species
LOC_Os07g46190.1	LOC_Os07g46190	pectin methylesterase	0.02	OrthoFinder output from all 47 species
Lfl_g09832	No alias	pectin methylesterase & original description: none	0.02	OrthoFinder output from all 47 species
MA_181657g0020	No alias	pectin methylesterase	0.02	OrthoFinder output from all 47 species
Mp2g01420.1	No alias	pectin methylesterase	0.02	OrthoFinder output from all 47 species
Ppi_g10459	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g40238	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g37886	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0030599	pectinesterase activity	IEA	Interproscan
BP	GO:0042545	cell wall modification	IEA	Interproscan
BP	GO:0045229	external encapsulating structure organization	None	Extended
MF	GO:0052689	carboxylic ester hydrolase activity	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003774	cytoskeletal motor activity	IEP	HCCA
MF	GO:0003777	microtubule motor activity	IEP	HCCA
MF	GO:0003855	3-dehydroquinate dehydratase activity	IEP	HCCA
MF	GO:0003993	acid phosphatase activity	IEP	HCCA
BP	GO:0007017	microtubule-based process	IEP	HCCA
BP	GO:0007018	microtubule-based movement	IEP	HCCA
MF	GO:0008017	microtubule binding	IEP	HCCA
MF	GO:0008092	cytoskeletal protein binding	IEP	HCCA
MF	GO:0015631	tubulin binding	IEP	HCCA
MF	GO:0016791	phosphatase activity	IEP	HCCA
MF	GO:0016829	lyase activity	IEP	HCCA
MF	GO:0016835	carbon-oxygen lyase activity	IEP	HCCA
MF	GO:0016836	hydro-lyase activity	IEP	HCCA
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0140657	ATP-dependent activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000070	Pectinesterase_cat	41	333

External Links

No external refs found!