1. Home
  2. Species
  3. Pyrrosia piloselloides
  4. Sequence
  5. Ppi_g43473

Ppi_g43473 (ATSS3, SS3)


Aliases : ATSS3, SS3

Description : starch synthase *(SS3) & original description: none


Gene families : OG0000693 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000693_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g43473
Cluster HCCA: Cluster_222

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00037p00164200 ATSS3, SS3,... Carbohydrate metabolism.starch... 0.03 OrthoFinder output from all 47 species
AT4G18240 ATSS4, SS4, SSIV starch synthase 4 0.06 OrthoFinder output from all 47 species
Aev_g25563 ATSS4, SS4, SSIV not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g13690 ATSS3, SS3 starch synthase *(SS3) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g04493 ATSS3, SS3 starch synthase *(SS3) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05284 ATSS3, SS3 starch synthase *(SS3) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g18815 ATSS4, SS4, SSIV starch synthase *(SS5) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.18G020900.1 ATSS3, SS3,... starch synthase *(SS3) & original description:... 0.02 OrthoFinder output from all 47 species
Cre06.g282000 ATSS3, SS3 Carbohydrate metabolism.starch... 0.01 OrthoFinder output from all 47 species
Cre16.g663850 ATSS4, SS4, SSIV Probable starch synthase 4, chloroplastic/amyloplastic... 0.01 OrthoFinder output from all 47 species
Dac_g10971 ATSS4, SS4, SSIV starch synthase *(SS4) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g01991 ATSS4, SS4, SSIV starch synthase *(SS5) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08981 ATSS3, SS3 starch synthase *(SS3) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g43255 ATSS4, SS4, SSIV not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14554 ATSS4, SS4, SSIV starch synthase *(SS5) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os04g53310.1 ATSS3, SS3,... starch synthase (SSIII) 0.03 OrthoFinder output from all 47 species
Len_g49747 ATSS4, SS4, SSIV starch synthase *(SS5) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g26184 ATSS4, SS4, SSIV starch synthase *(SS4) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g12030 No alias starch synthase *(SS5) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29362 No alias starch synthase *(SS4) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g51042 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g071040.3.1 ATSS4, SS4,... starch synthase (SSIV) 0.02 OrthoFinder output from all 47 species
Spa_g17570 ATSS3, SS3 starch synthase *(SS3) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e006886_P001 ATSS3, SS3,... starch synthase (SSIII) 0.01 OrthoFinder output from all 47 species
Zm00001e027473_P001 ATSS4, SS4,... starch synthase (SSIV) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:2001070 starch binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0004743 pyruvate kinase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0030955 potassium ion binding IEP HCCA
MF GO:0031420 alkali metal ion binding IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
InterPro domains Description Start Stop
IPR001296 Glyco_trans_1 984 1146
IPR013534 Starch_synth_cat_dom 737 925
IPR005085 CBM25 304 381
IPR005085 CBM25 639 726
IPR005085 CBM25 477 563
No external refs found!