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Ppi_g45378 (DCL1, CAF, EMB76,...)


Aliases : DCL1, CAF, EMB76, SIN1, ATDCL1, EMB60, SUS1, ASU1

Description : not classified & original description: none


Gene families : OG0000378 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000378_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g45378

Target Alias Description ECC score Gene Family Method Actions
Adi_g010424 DCL4, ATDCL4 endoribonuclease (DCL4) of transacting siRNA pathway &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene32280.t1 ATDCL2, DCL2,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Gb_33864 DCL1, CAF,... ribonuclease (RTL2) 0.01 OrthoFinder output from all 47 species
LOC_Os03g38740.1 ATDCL2, DCL2,... Endoribonuclease Dicer homolog 2a OS=Oryza sativa subsp.... 0.01 OrthoFinder output from all 47 species
Mp7g16380.1 DCL1, CAF,... Endoribonuclease Dicer homolog 1 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Smo122841 DCL1, CAF,... Endoribonuclease Dicer homolog 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc07g049150.2.1 ATRTL1, RTL1,... Ribonuclease 3-like protein 3 OS=Oryza sativa subsp.... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR000999 RNase_III_dom 670 782
IPR003100 PAZ_dom 512 629
No external refs found!