Ppi_g47945

Description : not classified & original description: none

Gene families : OG0000103 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000103_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ppi_g47945

Target	Alias	Description	ECC score	Gene Family Method
Ala_g20484	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g31900	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g12587	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Lfl_g24298	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012832	No alias	not classified & original description: CDS=1-630	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s1786.g028162	No alias	not classified & original description: CDS=1-1269	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s1786.g028163	No alias	not classified & original description: CDS=1-1014	0.03	OrthoFinder output from all 47 species
Sam_g40443	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000157	TIR_dom	30	136
IPR002182	NB-ARC	219	448

External Links

No external refs found!