Ppi_g48216 (IAA4, ATAUX2-11)


Aliases : IAA4, ATAUX2-11

Description : transcriptional repressor *(IAA/AUX) & original description: none


Gene families : OG0000146 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000146_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g48216

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00122p00021940 IAA16,... Auxin-responsive protein IAA16 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00184p00030540 IAA9,... Auxin-responsive protein IAA9 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Aev_g04091 IAA16 transcriptional repressor *(IAA/AUX) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g05487 IAA16 transcriptional repressor *(IAA/AUX) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene04698.t1 IAA27, PAP2,... transcriptional repressor *(IAA/AUX) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene61410.t1 IAA8, Aspi01Gene61410 transcriptional repressor *(IAA/AUX) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s1618.g104764 IAA13 transcriptional repressor *(IAA/AUX) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g08125 IAA13 transcriptional repressor *(IAA/AUX) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g21646 IAA11 transcriptional repressor *(IAA/AUX) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01011841001 IAA32, MEE10 Auxin-responsive protein IAA32 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os02g49160.1 IAA31, LOC_Os02g49160 Auxin-responsive protein IAA8 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
MA_53529g0010 IAA27, PAP2 Auxin-responsive protein IAA30 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Msp_g14922 SLR, IAA14 transcriptional repressor *(IAA/AUX) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g04784 IAA3, SHY2 transcriptional repressor *(IAA/AUX) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g17809 IAA16 transcriptional repressor *(IAA/AUX) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g120380.3.1 MSG2, IAA19,... Auxin-induced protein AUX22 OS=Glycine max... 0.02 OrthoFinder output from all 47 species
Solyc06g008580.3.1 IAA3, SHY2,... Auxin-induced protein 22D OS=Vigna radiata var. radiata... 0.03 OrthoFinder output from all 47 species
Spa_g16142 IAA3, SHY2 transcriptional repressor *(IAA/AUX) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e005073_P001 IAA3, SHY2,... Auxin-responsive protein IAA12 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0008519 ammonium transmembrane transporter activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0072488 ammonium transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR033389 AUX/IAA_dom 92 390
No external refs found!