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  5. Ppi_g48536

Ppi_g48536 (SPD1)


Aliases : SPD1

Description : not classified & original description: none


Gene families : OG0001410 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001410_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g48536
Cluster HCCA: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
AT1G73170 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 OrthoFinder output from all 47 species
Adi_g108757 SPD1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g30094 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g02605 SPD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07290 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g15207 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15208 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g03538 SPD1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene24193.t1 Aspi01Gene24193 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0032.g024929 No alias not classified & original description: CDS=579-2060 0.03 OrthoFinder output from all 47 species
Cba_g18558 SPD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.08G016100.1 Ceric.08G016100 not classified & original description: pacid=50637973... 0.09 OrthoFinder output from all 47 species
Ceric.34G074300.1 SPD1, Ceric.34G074300 not classified & original description: pacid=50622982... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001215.19 No alias No description available 0.04 OrthoFinder output from all 47 species
Cre16.g676850 SPD1 No description available 0.01 OrthoFinder output from all 47 species
Dac_g01740 SPD1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g05731 SPD1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g06628 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g11178 SPD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18471 SPD1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01014235001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01016194001 SPD1 No description available 0.01 OrthoFinder output from all 47 species
LOC_Os06g06190.1 LOC_Os06g06190 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os07g08970.1 SPD1, LOC_Os07g08970 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g30692 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g08861 SPD1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10427944g0010 SPD1 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10433691g0010 SPD1 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp5g22990.1 SPD1 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Pir_g08814 SPD1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g08230 SPD1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g01932 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13947 SPD1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e011428_P004 SPD1, Zm00001e011428 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e030045_P004 Zm00001e030045 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP HCCA
MF GO:0004751 ribose-5-phosphate isomerase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006544 glycine metabolic process IEP HCCA
BP GO:0006546 glycine catabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0006817 phosphate ion transport IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP HCCA
BP GO:0009063 amino acid catabolic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009071 serine family amino acid catabolic process IEP HCCA
BP GO:0009767 photosynthetic electron transport chain IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR045735 Spore_III_AA_AAA+_ATPase 177 303
No external refs found!