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  5. Ppi_g49398

Ppi_g49398 (SUA)


Aliases : SUA

Description : not classified & original description: none


Gene families : OG0002445 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002445_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g49398

Target Alias Description ECC score Gene Family Method Actions
AT3G54230 SUA suppressor of abi3-5 0.03 OrthoFinder output from all 47 species
Adi_g004603 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g014405 SUA not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g058381 SUA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g105523 SUA not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g24331 SUA not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g24332 SUA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06676 SUA not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g37096 SUA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20905 SUA not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g22735 SUA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g63953 SUA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04658 SUA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34129.t1 SUA, Aspi01Gene34129 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g31749 SUA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G030500.1 SUA, Ceric.01G030500 not classified & original description: pacid=50592465... 0.04 OrthoFinder output from all 47 species
Ceric.22G052600.1 SUA, Ceric.22G052600 not classified & original description: pacid=50613886... 0.03 OrthoFinder output from all 47 species
Cre03.g184350 SUA SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dcu_g14899 SUA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g19614 SUA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02935 SUA not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01013204001 SUA SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Gb_28214 SUA SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os02g07070.1 SUA, LOC_Os02g07070 SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Lfl_g08592 SUA not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g29782 SUA not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_188532g0010 SUA SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp1g04870.1 SUA SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Ore_g07127 SUA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g20001 SUA not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16370 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g25177 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo402018 SUA SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Smo407112 SUA SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc08g077310.3.1 SUA, Solyc08g077310 SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Tin_g13781 SUA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e033409_P006 SUA, Zm00001e033409 SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005669 transcription factor TFIID complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 313 371
IPR000504 RRM_dom 470 536
IPR041591 OCRE 614 663
No external refs found!