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  5. Ppi_g51058

Ppi_g51058


Description : LIM-type transcription factor & original description: none


Gene families : OG0001474 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001474_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g51058
Cluster HCCA: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
Als_g22072 No alias LIM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g13101 WLIM1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g43336 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g19676 WLIM1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g26042 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g61820 No alias LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g16397 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g24488 WLIM1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g26863 WLIM1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g28867 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0016485 protein processing IEP HCCA
BP GO:0016540 protein autoprocessing IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
InterPro domains Description Start Stop
IPR001781 Znf_LIM 11 66
No external refs found!