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  5. Ppi_g52658

Ppi_g52658 (SEB1, COBL7, ATSEB1)


Aliases : SEB1, COBL7, ATSEB1

Description : regulatory protein *(COB) of cellulose-hemicellulose network assembly & original description: none


Gene families : OG0000498 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000498_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g52658

Target Alias Description ECC score Gene Family Method Actions
AT5G49270 COBL9, MRH4, SHV2, DER9 COBRA-like extracellular glycosyl-phosphatidyl... 0.02 OrthoFinder output from all 47 species
Azfi_s0018.g014792 COB regulatory protein *(COB) of cellulose-hemicellulose... 0.04 OrthoFinder output from all 47 species
Dcu_g01570 SEB1, COBL7, ATSEB1 regulatory protein *(COB) of cellulose-hemicellulose... 0.04 OrthoFinder output from all 47 species
Dde_g00771 SEB1, COBL7, ATSEB1 regulatory protein *(COB) of cellulose-hemicellulose... 0.02 OrthoFinder output from all 47 species
GSVIVT01035050001 SEB1, COBL7, ATSEB1 Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.02 OrthoFinder output from all 47 species
Gb_25603 COBL1 COB cellulose microfibrils and hemicellulose interaction protein 0.02 OrthoFinder output from all 47 species
MA_40967g0020 COB COB cellulose microfibrils and hemicellulose interaction protein 0.02 OrthoFinder output from all 47 species
Solyc09g075540.1.1 SEB1, COBL7,... COB cellulose microfibrils and hemicellulose interaction protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0010215 cellulose microfibril organization IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004325 ferrochelatase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006783 heme biosynthetic process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0042168 heme metabolic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006918 COBRA_pln 217 398
No external refs found!