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  5. Ppi_g53382

Ppi_g53382


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g53382
Cluster HCCA: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00155170 CRR2,... Pentatricopeptide repeat-containing protein At3g46790,... 0.03 OrthoFinder output from all 47 species
AT1G77150 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G24000 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G46790 CRR2 Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g036420 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g080993 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g109885 DOT4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g42356 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g43288 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g44730 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30905 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g54766 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54955 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g62017 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g07402 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g09057 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g09923 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g36878 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g42153 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03817 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07902 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68030 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34104.t1 OTP84, Aspi01Gene34104 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0641.g080692 No alias not classified & original description: CDS=1-1947 0.04 OrthoFinder output from all 47 species
Cba_g06497 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07614 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29692 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g77978 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.1Z045400.1 Ceric.1Z045400 not classified & original description: pacid=50637450... 0.04 OrthoFinder output from all 47 species
Ceric.25G070400.1 Ceric.25G070400 not classified & original description: pacid=50594567... 0.03 OrthoFinder output from all 47 species
Dac_g00285 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g24618 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g29961 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43623 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g16911 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g18372 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26440 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g48000 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g09547 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18567 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g03398 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07126 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07374 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07719 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g09949 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g29093 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32657 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g35996 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g37815 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g38215 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10138132g0010 No alias Pentatricopeptide repeat-containing protein At3g02330,... 0.03 OrthoFinder output from all 47 species
MA_10427854g0020 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
Msp_g03152 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27966 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g08923 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g25357 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12099 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g51366 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0031.g010549 No alias not classified & original description: CDS=364-2607 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0090.g018727 No alias not classified & original description: CDS=1-2163 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0215.g026034 OTP84 not classified & original description: CDS=2081-4369 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0321.g027231 No alias substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.03 OrthoFinder output from all 47 species
Sam_g21254 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29238 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g37903 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g08239 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12249 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14545 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g22574 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g49369 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53284 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g01122 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g05165 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06121 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06393 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06624 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06670 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10336 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17460 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g18426 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19239 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g23009 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26549 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g35685 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g44697 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e033826_P001 Zm00001e033826 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005544 calcium-dependent phospholipid binding IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 50 75
IPR002885 Pentatricopeptide_repeat 356 378
IPR002885 Pentatricopeptide_repeat 254 277
IPR002885 Pentatricopeptide_repeat 11 41
IPR002885 Pentatricopeptide_repeat 152 175
IPR002885 Pentatricopeptide_repeat 76 122
IPR002885 Pentatricopeptide_repeat 279 326
IPR002885 Pentatricopeptide_repeat 177 224
No external refs found!