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  5. Ppi_g56884

Ppi_g56884 (CPN60B, LEN1)


Aliases : CPN60B, LEN1

Description : chaperone *(Hsp60) & original description: none


Gene families : OG0000688 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000688_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g56884
Cluster HCCA: Cluster_255

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00260480 evm_27.TU.AmTr_v1... External stimuli response.temperature.Hsp... 0.04 OrthoFinder output from all 47 species
AMTR_s00009p00080200 CH-CPN60A,... External stimuli response.temperature.Hsp... 0.03 OrthoFinder output from all 47 species
AMTR_s00062p00185880 CH-CPN60A,... External stimuli response.temperature.Hsp... 0.03 OrthoFinder output from all 47 species
AMTR_s00106p00119930 CPN60B, LEN1,... External stimuli response.temperature.Hsp... 0.04 OrthoFinder output from all 47 species
AT1G26230 No alias TCP-1/cpn60 chaperonin family protein 0.04 OrthoFinder output from all 47 species
AT1G55490 CPN60B, LEN1 chaperonin 60 beta 0.05 OrthoFinder output from all 47 species
AT3G13470 No alias TCP-1/cpn60 chaperonin family protein 0.02 OrthoFinder output from all 47 species
Adi_g013083 No alias chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058751 CH-CPN60A, CPN60A, SLP not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g02236 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.1 OrthoFinder output from all 47 species
Ala_g07607 No alias chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11846 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g26318 No alias chaperone *(Hsp60) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g08982 CH-CPN60A, CPN60A, SLP chaperone *(Hsp60) & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0001.g000356 No alias chaperone *(Hsp60) & original description: CDS=314-2140 0.02 OrthoFinder output from all 47 species
Azfi_s0217.g058536 CPN60B, LEN1 chaperone *(Hsp60) & original description: CDS=281-2059 0.04 OrthoFinder output from all 47 species
Cba_g03270 No alias chaperone *(Hsp60) & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g03962 CH-CPN60A, CPN60A, SLP chaperone *(Hsp60) & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g13701 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Cre04.g231222 CH-CPN60A, CPN60A, SLP External stimuli response.temperature.Hsp... 0.04 OrthoFinder output from all 47 species
Cre07.g339150 No alias External stimuli response.temperature.Hsp... 0.02 OrthoFinder output from all 47 species
Cre17.g741450 CPN60B, LEN1 External stimuli response.temperature.Hsp... 0.02 OrthoFinder output from all 47 species
Dac_g15356 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g19819 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03882 CH-CPN60A, CPN60A, SLP chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g07618 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g08062 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g03726 No alias chaperone *(Hsp60) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01010149001 No alias External stimuli response.temperature.Hsp... 0.04 OrthoFinder output from all 47 species
GSVIVT01025490001 No alias External stimuli response.temperature.Hsp... 0.02 OrthoFinder output from all 47 species
GSVIVT01031526001 CH-CPN60A, CPN60A, SLP External stimuli response.temperature.Hsp... 0.03 OrthoFinder output from all 47 species
LOC_Os06g02380.2 CPN60B, LEN1,... subunit beta of Cpn60 chaperonin complex. component... 0.03 OrthoFinder output from all 47 species
LOC_Os12g17910.1 CH-CPN60A,... subunit alpha of Cpn60 chaperonin complex. component... 0.02 OrthoFinder output from all 47 species
Len_g13340 CH-CPN60A, CPN60A, SLP chaperone *(Hsp60) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g28966 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10436772g0010 CH-CPN60A, CPN60A, SLP chaperone (Hsp60) 0.02 OrthoFinder output from all 47 species
MA_97627g0010 No alias Chaperonin 60 subunit beta 2, chloroplastic... 0.02 OrthoFinder output from all 47 species
Mp1g21640.1 No alias subunit beta of Cpn60 chaperonin complex. component... 0.02 OrthoFinder output from all 47 species
Mp5g20470.1 CH-CPN60A, CPN60A, SLP subunit alpha of Cpn60 chaperonin complex. component... 0.03 OrthoFinder output from all 47 species
Msp_g08431 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g11382 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g15426 CH-CPN60A, CPN60A, SLP chaperone *(Hsp60) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g09829 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g10336 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g09116 CH-CPN60A, CPN60A, SLP chaperone *(Hsp60) & original description: none 0.05 OrthoFinder output from all 47 species
Pp3c16_4660V3.1 CPN60B, LEN1, Pp3c16_4660 chaperonin 60 beta 0.02 OrthoFinder output from all 47 species
Pp3c24_12180V3.1 CH-CPN60A,... chaperonin-60alpha 0.02 OrthoFinder output from all 47 species
Ppi_g14667 CH-CPN60A, CPN60A, SLP chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0065.g016064 No alias chaperone *(Hsp60) & original description: CDS=1-1875 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0182.g024885 CPN60B, LEN1 chaperone *(Hsp60) & original description: CDS=136-1980 0.04 OrthoFinder output from all 47 species
Sam_g24182 No alias chaperone *(Hsp60) & original description: none 0.02 OrthoFinder output from all 47 species
Smo168153 CPN60B, LEN1 External stimuli response.temperature.Hsp... 0.03 OrthoFinder output from all 47 species
Solyc03g120850.4.1 CPN60B, LEN1,... subunit beta of Cpn60 chaperonin complex. component... 0.03 OrthoFinder output from all 47 species
Solyc05g010240.4.1 Solyc05g010240 subunit beta of Cpn60 chaperonin complex. component... 0.05 OrthoFinder output from all 47 species
Spa_g09931 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06882 No alias chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001025_P002 Zm00001e001025 subunit beta of Cpn60 chaperonin complex. component... 0.02 OrthoFinder output from all 47 species
Zm00001e006438_P001 CH-CPN60A,... subunit alpha of Cpn60 chaperonin complex. component... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
InterPro domains Description Start Stop
IPR002423 Cpn60/GroEL/TCP-1 84 587
No external refs found!