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  5. Ppi_g57451

Ppi_g57451


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g57451
Cluster HCCA: Cluster_252

Target Alias Description ECC score Gene Family Method Actions
AT1G31010 OSB4 organellar single-stranded DNA binding protein 4 0.02 OrthoFinder output from all 47 species
Adi_g003776 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g005657 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g011924 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036507 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g069040 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g074266 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g102361 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g33525 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g48795 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g04109 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18909 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30199 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27902 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37107 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04156 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g33585 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68127 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene00343.t1 Aspi01Gene00343 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0008.g011300 No alias not classified & original description: CDS=1-2337 0.03 OrthoFinder output from all 47 species
Azfi_s0021.g015813 No alias not classified & original description: CDS=355-3027 0.03 OrthoFinder output from all 47 species
Azfi_s0022.g016134 OTP84 not classified & original description: CDS=1-2358 0.02 OrthoFinder output from all 47 species
Azfi_s0042.g026834 No alias not classified & original description: CDS=1-1929 0.03 OrthoFinder output from all 47 species
Cba_g68954 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g75809 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.07G042200.1 Ceric.07G042200 not classified & original description: pacid=50626031... 0.02 OrthoFinder output from all 47 species
Ceric.20G007900.1 Ceric.20G007900 not classified & original description: pacid=50566810... 0.04 OrthoFinder output from all 47 species
Ceric.28G062700.1 Ceric.28G062700 not classified & original description: pacid=50570794... 0.02 OrthoFinder output from all 47 species
Ceric.35G063700.1 Ceric.35G063700 not classified & original description: pacid=50581590... 0.02 OrthoFinder output from all 47 species
Dac_g13535 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g23031 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g24393 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30446 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g31782 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g42743 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08946 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g16929 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21331 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g41493 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01025574001 No alias Pentatricopeptide repeat-containing protein At2g37320... 0.02 OrthoFinder output from all 47 species
Gb_36775 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
LOC_Os05g24150.1 LOC_Os05g24150 Pentatricopeptide repeat-containing protein At2g34400... 0.02 OrthoFinder output from all 47 species
LOC_Os05g38190.2 LOC_Os05g38190 Pentatricopeptide repeat-containing protein At2g27610... 0.02 OrthoFinder output from all 47 species
Len_g00723 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g17972 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g23812 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g30026 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_8893194g0010 MEF1 RNA editing factor (MEF1) 0.02 OrthoFinder output from all 47 species
Msp_g18814 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g28772 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g34436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06673 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25474 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g38541 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g42294 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g05131 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30777 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g36668 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g38356 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g05188 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57349 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05658 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g09492 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18927 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g22205 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002236 No alias not classified & original description: CDS=1-2649 0.03 OrthoFinder output from all 47 species
Sam_g12347 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13564 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g33616 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g30543 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14007 MEF1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20193 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g34879 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g38826 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 224 248
IPR002885 Pentatricopeptide_repeat 252 270
IPR002885 Pentatricopeptide_repeat 150 178
No external refs found!