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  5. Ppi_g60005

Ppi_g60005


Description : histone *(H3) & original description: none


Gene families : OG0000128 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000128_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g60005

Target Alias Description ECC score Gene Family Method Actions
AT1G09200 No alias Histone superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G27360 No alias Histone superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G10390 No alias Histone superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G10400 No alias Histone superfamily protein 0.02 OrthoFinder output from all 47 species
Aev_g08007 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12785 No alias histone H3 variant *(CENH3) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26587 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g30174 No alias histone *(H3) & original description: none 0.05 OrthoFinder output from all 47 species
Als_g43453 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07784 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g33085 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g36137 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene01982.t1 Aspi01Gene01982 histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene02058.t1 Aspi01Gene02058 histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene42452.t1 Aspi01Gene42452 histone H3 variant *(CENH3) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.14G051800.1 Ceric.14G051800 not classified & original description: pacid=50634871... 0.03 OrthoFinder output from all 47 species
Ceric.19G072200.1 Ceric.19G072200 histone *(H3) & original description: pacid=50576221... 0.05 OrthoFinder output from all 47 species
Ceric.1Z177000.1 Ceric.1Z177000 histone *(H3) & original description: pacid=50628432... 0.05 OrthoFinder output from all 47 species
Ceric.27G029000.1 Ceric.27G029000 histone *(H3) & original description: pacid=50605580... 0.05 OrthoFinder output from all 47 species
Ceric.37G016300.1 Ceric.37G016300 histone *(H3) & original description: pacid=50616425... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000970.26 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g265250 No alias Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder output from all 47 species
Cre06.g266650 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g267950 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g274000 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g274101 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g274350 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g274850 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g275750 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g276600 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g276850 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre12.g504650 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre12.g504800 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre12.g505500 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre12.g506300 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre12.g506500 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre13.g569950 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre17.g708150 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre17.g708700 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre17.g709050 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Dac_g02480 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01034510001 No alias Histone H3.2 OS=Pisum sativum 0.04 OrthoFinder output from all 47 species
Gb_23769 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_29027 No alias histone (H3) 0.02 OrthoFinder output from all 47 species
Gb_30564 No alias histone (H3) 0.02 OrthoFinder output from all 47 species
LOC_Os06g06460.1 LOC_Os06g06460 histone (H3) 0.02 OrthoFinder output from all 47 species
Len_g04468 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g05015 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g26206 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g23375 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
MA_113838g0010 No alias histone (H3) 0.02 OrthoFinder output from all 47 species
MA_222556g0010 No alias Histone H3.2 OS=Lilium longiflorum (sp|q402e1|h32_lillo : 116.0) 0.02 OrthoFinder output from all 47 species
MA_356208g0010 No alias histone (H3) 0.02 OrthoFinder output from all 47 species
Mp3g09090.1 No alias histone (H3) 0.03 OrthoFinder output from all 47 species
Mp3g11410.1 No alias histone (H3) 0.02 OrthoFinder output from all 47 species
Ore_g06293 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g25724 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g41472 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g20165 No alias histone H3 variant *(CENH3) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g077480.1.1 Solyc02g077480 histone (H3) 0.03 OrthoFinder output from all 47 species
Spa_g04339 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g33705 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g42522 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g52114 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g56118 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g03087 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g04242 No alias histone *(H3) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e008155_P001 Zm00001e008155 histone (H3) 0.02 OrthoFinder output from all 47 species
Zm00001e008160_P001 Zm00001e008160 histone (H3) 0.04 OrthoFinder output from all 47 species
Zm00001e016861_P001 Zm00001e016861 histone (H3) 0.03 OrthoFinder output from all 47 species
Zm00001e019170_P001 Zm00001e019170 histone (H3) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 1 132
No external refs found!